Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads

Here, we present the complete genome sequence of a highly virulent Leptospira interrogans serovar Copenhageni strain isolated from a dog with severe leptospirosis. In this work, a gapless genome draft was assembled with a combination of Nanopore and Illumina data of relatively low coverage.

Detalles Bibliográficos
Autores principales: Llanes, Alejandro, Prakoso, Dhani, Restrepo, Carlos Mario, Rajeev, Sreekumari
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7180280/
https://www.ncbi.nlm.nih.gov/pubmed/32327507
http://dx.doi.org/10.1128/MRA.00200-20
_version_ 1783525787016626176
author Llanes, Alejandro
Prakoso, Dhani
Restrepo, Carlos Mario
Rajeev, Sreekumari
author_facet Llanes, Alejandro
Prakoso, Dhani
Restrepo, Carlos Mario
Rajeev, Sreekumari
author_sort Llanes, Alejandro
collection PubMed
description Here, we present the complete genome sequence of a highly virulent Leptospira interrogans serovar Copenhageni strain isolated from a dog with severe leptospirosis. In this work, a gapless genome draft was assembled with a combination of Nanopore and Illumina data of relatively low coverage.
format Online
Article
Text
id pubmed-7180280
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-71802802020-04-30 Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads Llanes, Alejandro Prakoso, Dhani Restrepo, Carlos Mario Rajeev, Sreekumari Microbiol Resour Announc Genome Sequences Here, we present the complete genome sequence of a highly virulent Leptospira interrogans serovar Copenhageni strain isolated from a dog with severe leptospirosis. In this work, a gapless genome draft was assembled with a combination of Nanopore and Illumina data of relatively low coverage. American Society for Microbiology 2020-04-23 /pmc/articles/PMC7180280/ /pubmed/32327507 http://dx.doi.org/10.1128/MRA.00200-20 Text en Copyright © 2020 Llanes et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Llanes, Alejandro
Prakoso, Dhani
Restrepo, Carlos Mario
Rajeev, Sreekumari
Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads
title Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads
title_full Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads
title_fullStr Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads
title_full_unstemmed Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads
title_short Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads
title_sort complete genome sequence of a virulent leptospira interrogans serovar copenhageni strain, assembled with a combination of nanopore and illumina reads
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7180280/
https://www.ncbi.nlm.nih.gov/pubmed/32327507
http://dx.doi.org/10.1128/MRA.00200-20
work_keys_str_mv AT llanesalejandro completegenomesequenceofavirulentleptospirainterrogansserovarcopenhagenistrainassembledwithacombinationofnanoporeandilluminareads
AT prakosodhani completegenomesequenceofavirulentleptospirainterrogansserovarcopenhagenistrainassembledwithacombinationofnanoporeandilluminareads
AT restrepocarlosmario completegenomesequenceofavirulentleptospirainterrogansserovarcopenhagenistrainassembledwithacombinationofnanoporeandilluminareads
AT rajeevsreekumari completegenomesequenceofavirulentleptospirainterrogansserovarcopenhagenistrainassembledwithacombinationofnanoporeandilluminareads

Ejemplares similares