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Can We Predict the Pressure Induced Phase Transition of Urea? Application of Quantum Molecular Dynamics
Crystalline urea undergoes polymorphic phase transition induced by high pressure. Form I, which is the most stable form at normal conditions and Form IV, which is the most stable form at 3.10 GPa, not only crystallize in various crystal systems but also differ significantly in the unit cell dimensio...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7180756/ https://www.ncbi.nlm.nih.gov/pubmed/32235582 http://dx.doi.org/10.3390/molecules25071584 |
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author | Mazurek, Anna Szeleszczuk, Łukasz Pisklak, Dariusz Maciej |
author_facet | Mazurek, Anna Szeleszczuk, Łukasz Pisklak, Dariusz Maciej |
author_sort | Mazurek, Anna |
collection | PubMed |
description | Crystalline urea undergoes polymorphic phase transition induced by high pressure. Form I, which is the most stable form at normal conditions and Form IV, which is the most stable form at 3.10 GPa, not only crystallize in various crystal systems but also differ significantly in the unit cell dimensions. The aim of this study was to determine if it is possible to predict polymorphic phase transitions by optimizing Form I at high pressure and Form IV at low pressure. To achieve this aim, a large number of periodic density functional theory (DFT) calculations were performed using CASTEP. After geometry optimization of Form IV at 0 GPa Form I was obtained, performing energy minimization of Form I at high pressure did not result in Form IV. However, employing quantum molecular isothermal–isobaric (NPT) dynamics calculations enabled to accurately predict this high-pressure transformation. This study shows the potential of different approaches in predicting the polymorphic phase transition and points to the key factors that are necessary to achieve the success. |
format | Online Article Text |
id | pubmed-7180756 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-71807562020-05-01 Can We Predict the Pressure Induced Phase Transition of Urea? Application of Quantum Molecular Dynamics Mazurek, Anna Szeleszczuk, Łukasz Pisklak, Dariusz Maciej Molecules Article Crystalline urea undergoes polymorphic phase transition induced by high pressure. Form I, which is the most stable form at normal conditions and Form IV, which is the most stable form at 3.10 GPa, not only crystallize in various crystal systems but also differ significantly in the unit cell dimensions. The aim of this study was to determine if it is possible to predict polymorphic phase transitions by optimizing Form I at high pressure and Form IV at low pressure. To achieve this aim, a large number of periodic density functional theory (DFT) calculations were performed using CASTEP. After geometry optimization of Form IV at 0 GPa Form I was obtained, performing energy minimization of Form I at high pressure did not result in Form IV. However, employing quantum molecular isothermal–isobaric (NPT) dynamics calculations enabled to accurately predict this high-pressure transformation. This study shows the potential of different approaches in predicting the polymorphic phase transition and points to the key factors that are necessary to achieve the success. MDPI 2020-03-30 /pmc/articles/PMC7180756/ /pubmed/32235582 http://dx.doi.org/10.3390/molecules25071584 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Mazurek, Anna Szeleszczuk, Łukasz Pisklak, Dariusz Maciej Can We Predict the Pressure Induced Phase Transition of Urea? Application of Quantum Molecular Dynamics |
title | Can We Predict the Pressure Induced Phase Transition of Urea? Application of Quantum Molecular Dynamics |
title_full | Can We Predict the Pressure Induced Phase Transition of Urea? Application of Quantum Molecular Dynamics |
title_fullStr | Can We Predict the Pressure Induced Phase Transition of Urea? Application of Quantum Molecular Dynamics |
title_full_unstemmed | Can We Predict the Pressure Induced Phase Transition of Urea? Application of Quantum Molecular Dynamics |
title_short | Can We Predict the Pressure Induced Phase Transition of Urea? Application of Quantum Molecular Dynamics |
title_sort | can we predict the pressure induced phase transition of urea? application of quantum molecular dynamics |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7180756/ https://www.ncbi.nlm.nih.gov/pubmed/32235582 http://dx.doi.org/10.3390/molecules25071584 |
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