Cargando…

A computational exploration into the structure, antioxidant capacity, toxicity and drug-like activity of the anthocyanidin “Petunidin”

A computational investigation on the structure and antioxidant property of a natural food colorant Petunidin (PT) was performed under DFT/B3LYP/6-31+ G (d, p). PT has a drug score of +0.804 which indicates its drug-like nature. The antioxidant property of PT was well explained by HAT mechanism and i...

Descripción completa

Detalles Bibliográficos
Autores principales: Rajan, Vijisha K., Ragi, C., Muraleedharan, K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7181340/
https://www.ncbi.nlm.nih.gov/pubmed/32346622
http://dx.doi.org/10.1016/j.heliyon.2019.e02115
_version_ 1783526025876996096
author Rajan, Vijisha K.
Ragi, C.
Muraleedharan, K.
author_facet Rajan, Vijisha K.
Ragi, C.
Muraleedharan, K.
author_sort Rajan, Vijisha K.
collection PubMed
description A computational investigation on the structure and antioxidant property of a natural food colorant Petunidin (PT) was performed under DFT/B3LYP/6-31+ G (d, p). PT has a drug score of +0.804 which indicates its drug-like nature. The antioxidant property of PT was well explained by HAT mechanism and it has been found that the electron releasing substituents decreases the BDE value. PT has lowest BDE value at C3 position and is confirmed by the lowest pKa value, high atomic charge and lowest bond order. PT easily donates the hydrogen atom and exists in the deprotonated form in blood as the pKa value at C3 is less than the pH value of blood. PT shows no violation to Lipinski's rule of 5 indicating its nature as an orally admissible drug. More over PT has considerable bioactivity against nuclear receptor ligand while it shows only moderate activity towards GPCR and ion channel modulator. Also it shows moderate activity as an enzyme inhibitor and protease inhibitor but shows considerable activity as a kinase inhibitor. PT is non toxic in nature and all these factors favor its use as a potential antioxidant and a drug.
format Online
Article
Text
id pubmed-7181340
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-71813402020-04-28 A computational exploration into the structure, antioxidant capacity, toxicity and drug-like activity of the anthocyanidin “Petunidin” Rajan, Vijisha K. Ragi, C. Muraleedharan, K. Heliyon Article A computational investigation on the structure and antioxidant property of a natural food colorant Petunidin (PT) was performed under DFT/B3LYP/6-31+ G (d, p). PT has a drug score of +0.804 which indicates its drug-like nature. The antioxidant property of PT was well explained by HAT mechanism and it has been found that the electron releasing substituents decreases the BDE value. PT has lowest BDE value at C3 position and is confirmed by the lowest pKa value, high atomic charge and lowest bond order. PT easily donates the hydrogen atom and exists in the deprotonated form in blood as the pKa value at C3 is less than the pH value of blood. PT shows no violation to Lipinski's rule of 5 indicating its nature as an orally admissible drug. More over PT has considerable bioactivity against nuclear receptor ligand while it shows only moderate activity towards GPCR and ion channel modulator. Also it shows moderate activity as an enzyme inhibitor and protease inhibitor but shows considerable activity as a kinase inhibitor. PT is non toxic in nature and all these factors favor its use as a potential antioxidant and a drug. Elsevier 2019-07-20 /pmc/articles/PMC7181340/ /pubmed/32346622 http://dx.doi.org/10.1016/j.heliyon.2019.e02115 Text en © 2019 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Rajan, Vijisha K.
Ragi, C.
Muraleedharan, K.
A computational exploration into the structure, antioxidant capacity, toxicity and drug-like activity of the anthocyanidin “Petunidin”
title A computational exploration into the structure, antioxidant capacity, toxicity and drug-like activity of the anthocyanidin “Petunidin”
title_full A computational exploration into the structure, antioxidant capacity, toxicity and drug-like activity of the anthocyanidin “Petunidin”
title_fullStr A computational exploration into the structure, antioxidant capacity, toxicity and drug-like activity of the anthocyanidin “Petunidin”
title_full_unstemmed A computational exploration into the structure, antioxidant capacity, toxicity and drug-like activity of the anthocyanidin “Petunidin”
title_short A computational exploration into the structure, antioxidant capacity, toxicity and drug-like activity of the anthocyanidin “Petunidin”
title_sort computational exploration into the structure, antioxidant capacity, toxicity and drug-like activity of the anthocyanidin “petunidin”
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7181340/
https://www.ncbi.nlm.nih.gov/pubmed/32346622
http://dx.doi.org/10.1016/j.heliyon.2019.e02115
work_keys_str_mv AT rajanvijishak acomputationalexplorationintothestructureantioxidantcapacitytoxicityanddruglikeactivityoftheanthocyanidinpetunidin
AT ragic acomputationalexplorationintothestructureantioxidantcapacitytoxicityanddruglikeactivityoftheanthocyanidinpetunidin
AT muraleedharank acomputationalexplorationintothestructureantioxidantcapacitytoxicityanddruglikeactivityoftheanthocyanidinpetunidin
AT rajanvijishak computationalexplorationintothestructureantioxidantcapacitytoxicityanddruglikeactivityoftheanthocyanidinpetunidin
AT ragic computationalexplorationintothestructureantioxidantcapacitytoxicityanddruglikeactivityoftheanthocyanidinpetunidin
AT muraleedharank computationalexplorationintothestructureantioxidantcapacitytoxicityanddruglikeactivityoftheanthocyanidinpetunidin