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Development and validation of data quality rules in administrative health data using association rule mining

BACKGROUND: Data quality assessment presents a challenge for research using coded administrative health data. The objective of this study is to develop and validate a set of coding association rules for coded diagnostic data. METHODS: We used the Canadian re-abstracted hospital discharge abstract da...

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Autores principales: Peng, Mingkai, Lee, Sangmin, D’Souza, Adam G., Doktorchik, Chelsea T. A., Quan, Hude
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7183129/
https://www.ncbi.nlm.nih.gov/pubmed/32334599
http://dx.doi.org/10.1186/s12911-020-1089-0
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author Peng, Mingkai
Lee, Sangmin
D’Souza, Adam G.
Doktorchik, Chelsea T. A.
Quan, Hude
author_facet Peng, Mingkai
Lee, Sangmin
D’Souza, Adam G.
Doktorchik, Chelsea T. A.
Quan, Hude
author_sort Peng, Mingkai
collection PubMed
description BACKGROUND: Data quality assessment presents a challenge for research using coded administrative health data. The objective of this study is to develop and validate a set of coding association rules for coded diagnostic data. METHODS: We used the Canadian re-abstracted hospital discharge abstract data coded in International Classification of Disease, 10th revision (ICD-10) codes. Association rule mining was conducted on the re-abstracted data in four age groups (0–4, 20–44, 45–64; ≥ 65) to extract ICD-10 coding association rules at the three-digit (category of diagnosis) and four-digit levels (category of diagnosis with etiology, anatomy, or severity). The rules were reviewed by a panel of 5 physicians and 2 classification specialists using a modified Delphi rating process. We proposed and defined the variance and bias to assess data quality using the rules. RESULTS: After the rule mining process and the panel review, 388 rules at the three-digit level and 275 rules at the four-digit level were developed. Half of the rules were from the age group of ≥65. Rules captured meaningful age-specific clinical associations, with rules at the age group of ≥65 being more complex and comprehensive than other age groups. The variance and bias can identify rules with high bias and variance in Alberta data and provides directions for quality improvement. CONCLUSIONS: A set of ICD-10 data quality rules were developed and validated by a clinical and classification expert panel. The rules can be used as a tool to assess ICD-coded data, enabling the monitoring and comparison of data quality across institutions, provinces, and countries.
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spelling pubmed-71831292020-04-28 Development and validation of data quality rules in administrative health data using association rule mining Peng, Mingkai Lee, Sangmin D’Souza, Adam G. Doktorchik, Chelsea T. A. Quan, Hude BMC Med Inform Decis Mak Research Article BACKGROUND: Data quality assessment presents a challenge for research using coded administrative health data. The objective of this study is to develop and validate a set of coding association rules for coded diagnostic data. METHODS: We used the Canadian re-abstracted hospital discharge abstract data coded in International Classification of Disease, 10th revision (ICD-10) codes. Association rule mining was conducted on the re-abstracted data in four age groups (0–4, 20–44, 45–64; ≥ 65) to extract ICD-10 coding association rules at the three-digit (category of diagnosis) and four-digit levels (category of diagnosis with etiology, anatomy, or severity). The rules were reviewed by a panel of 5 physicians and 2 classification specialists using a modified Delphi rating process. We proposed and defined the variance and bias to assess data quality using the rules. RESULTS: After the rule mining process and the panel review, 388 rules at the three-digit level and 275 rules at the four-digit level were developed. Half of the rules were from the age group of ≥65. Rules captured meaningful age-specific clinical associations, with rules at the age group of ≥65 being more complex and comprehensive than other age groups. The variance and bias can identify rules with high bias and variance in Alberta data and provides directions for quality improvement. CONCLUSIONS: A set of ICD-10 data quality rules were developed and validated by a clinical and classification expert panel. The rules can be used as a tool to assess ICD-coded data, enabling the monitoring and comparison of data quality across institutions, provinces, and countries. BioMed Central 2020-04-25 /pmc/articles/PMC7183129/ /pubmed/32334599 http://dx.doi.org/10.1186/s12911-020-1089-0 Text en © The Author(s). 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Peng, Mingkai
Lee, Sangmin
D’Souza, Adam G.
Doktorchik, Chelsea T. A.
Quan, Hude
Development and validation of data quality rules in administrative health data using association rule mining
title Development and validation of data quality rules in administrative health data using association rule mining
title_full Development and validation of data quality rules in administrative health data using association rule mining
title_fullStr Development and validation of data quality rules in administrative health data using association rule mining
title_full_unstemmed Development and validation of data quality rules in administrative health data using association rule mining
title_short Development and validation of data quality rules in administrative health data using association rule mining
title_sort development and validation of data quality rules in administrative health data using association rule mining
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7183129/
https://www.ncbi.nlm.nih.gov/pubmed/32334599
http://dx.doi.org/10.1186/s12911-020-1089-0
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