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Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential
Burkholderia sp. strain SSG is a boxwood endophyte with potent antagonistic activities against a variety of plant pathogens. Here we present its complete genome sequence that is 8.6 Mb long with a GC content of 66.9%, 10,209 predicted protein-coding sequences, and 866 secondary metabolism gene clust...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7184123/ https://www.ncbi.nlm.nih.gov/pubmed/32368513 http://dx.doi.org/10.1016/j.btre.2020.e00455 |
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author | Kong, Ping Hong, Chuanxue |
author_facet | Kong, Ping Hong, Chuanxue |
author_sort | Kong, Ping |
collection | PubMed |
description | Burkholderia sp. strain SSG is a boxwood endophyte with potent antagonistic activities against a variety of plant pathogens. Here we present its complete genome sequence that is 8.6 Mb long with a GC content of 66.9%, 10,209 predicted protein-coding sequences, and 866 secondary metabolism gene clusters. Many of these genes and clusters involve antibiosis and other antagonistic activities against plant pathogens and insect pests as well as plant growth promoting traits but none for the Burkholderia cepacia epidemic strain marker. This genome sequence supports SSG as a potent biocontrol agent and source of other biotechnological applications. |
format | Online Article Text |
id | pubmed-7184123 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-71841232020-05-04 Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential Kong, Ping Hong, Chuanxue Biotechnol Rep (Amst) Short Communication Burkholderia sp. strain SSG is a boxwood endophyte with potent antagonistic activities against a variety of plant pathogens. Here we present its complete genome sequence that is 8.6 Mb long with a GC content of 66.9%, 10,209 predicted protein-coding sequences, and 866 secondary metabolism gene clusters. Many of these genes and clusters involve antibiosis and other antagonistic activities against plant pathogens and insect pests as well as plant growth promoting traits but none for the Burkholderia cepacia epidemic strain marker. This genome sequence supports SSG as a potent biocontrol agent and source of other biotechnological applications. Elsevier 2020-04-14 /pmc/articles/PMC7184123/ /pubmed/32368513 http://dx.doi.org/10.1016/j.btre.2020.e00455 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Short Communication Kong, Ping Hong, Chuanxue Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential |
title | Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential |
title_full | Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential |
title_fullStr | Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential |
title_full_unstemmed | Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential |
title_short | Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential |
title_sort | complete genome sequence of a boxwood endophyte burkholderia sp. ssg with broad biotechnological application potential |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7184123/ https://www.ncbi.nlm.nih.gov/pubmed/32368513 http://dx.doi.org/10.1016/j.btre.2020.e00455 |
work_keys_str_mv | AT kongping completegenomesequenceofaboxwoodendophyteburkholderiaspssgwithbroadbiotechnologicalapplicationpotential AT hongchuanxue completegenomesequenceofaboxwoodendophyteburkholderiaspssgwithbroadbiotechnologicalapplicationpotential |