Cargando…

Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential

Burkholderia sp. strain SSG is a boxwood endophyte with potent antagonistic activities against a variety of plant pathogens. Here we present its complete genome sequence that is 8.6 Mb long with a GC content of 66.9%, 10,209 predicted protein-coding sequences, and 866 secondary metabolism gene clust...

Descripción completa

Detalles Bibliográficos
Autores principales: Kong, Ping, Hong, Chuanxue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7184123/
https://www.ncbi.nlm.nih.gov/pubmed/32368513
http://dx.doi.org/10.1016/j.btre.2020.e00455
_version_ 1783526556798287872
author Kong, Ping
Hong, Chuanxue
author_facet Kong, Ping
Hong, Chuanxue
author_sort Kong, Ping
collection PubMed
description Burkholderia sp. strain SSG is a boxwood endophyte with potent antagonistic activities against a variety of plant pathogens. Here we present its complete genome sequence that is 8.6 Mb long with a GC content of 66.9%, 10,209 predicted protein-coding sequences, and 866 secondary metabolism gene clusters. Many of these genes and clusters involve antibiosis and other antagonistic activities against plant pathogens and insect pests as well as plant growth promoting traits but none for the Burkholderia cepacia epidemic strain marker. This genome sequence supports SSG as a potent biocontrol agent and source of other biotechnological applications.
format Online
Article
Text
id pubmed-7184123
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-71841232020-05-04 Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential Kong, Ping Hong, Chuanxue Biotechnol Rep (Amst) Short Communication Burkholderia sp. strain SSG is a boxwood endophyte with potent antagonistic activities against a variety of plant pathogens. Here we present its complete genome sequence that is 8.6 Mb long with a GC content of 66.9%, 10,209 predicted protein-coding sequences, and 866 secondary metabolism gene clusters. Many of these genes and clusters involve antibiosis and other antagonistic activities against plant pathogens and insect pests as well as plant growth promoting traits but none for the Burkholderia cepacia epidemic strain marker. This genome sequence supports SSG as a potent biocontrol agent and source of other biotechnological applications. Elsevier 2020-04-14 /pmc/articles/PMC7184123/ /pubmed/32368513 http://dx.doi.org/10.1016/j.btre.2020.e00455 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Short Communication
Kong, Ping
Hong, Chuanxue
Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential
title Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential
title_full Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential
title_fullStr Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential
title_full_unstemmed Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential
title_short Complete genome sequence of a boxwood endophyte Burkholderia sp. SSG with broad biotechnological application potential
title_sort complete genome sequence of a boxwood endophyte burkholderia sp. ssg with broad biotechnological application potential
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7184123/
https://www.ncbi.nlm.nih.gov/pubmed/32368513
http://dx.doi.org/10.1016/j.btre.2020.e00455
work_keys_str_mv AT kongping completegenomesequenceofaboxwoodendophyteburkholderiaspssgwithbroadbiotechnologicalapplicationpotential
AT hongchuanxue completegenomesequenceofaboxwoodendophyteburkholderiaspssgwithbroadbiotechnologicalapplicationpotential