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Matching Reads to Many Genomes with the r-Index
The r-index is a tool for compressed indexing of genomic databases for exact pattern matching, which can be used to completely align reads that perfectly match some part of a genome in the database or to find seeds for reads that do not. This article shows how to download and install the programs ri...
Autores principales: | Mun, Taher, Kuhnle, Alan, Boucher, Christina, Gagie, Travis, Langmead, Ben, Manzini, Giovanni |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Mary Ann Liebert, Inc., publishers
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7185317/ https://www.ncbi.nlm.nih.gov/pubmed/32181686 http://dx.doi.org/10.1089/cmb.2019.0316 |
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