Cargando…

A decision support scheme for beta thalassemia and HbE carrier screening

The most effective way to combat β-thalassemias is to prevent the birth of children with thalassemia major. Therefore, a cost-effective screening method is essential to identify β-thalassemia traits (BTT) and differentiate normal individuals from carriers. We considered five hematological parameters...

Descripción completa

Detalles Bibliográficos
Autores principales: Das, Reena, Datta, Saikat, Kaviraj, Anilava, Sanyal, Soumendra Nath, Nielsen, Peter, Nielsen, Izabela, Sharma, Prashant, Sanyal, Tanmay, Dey, Kartick, Saha, Subrata
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7186556/
https://www.ncbi.nlm.nih.gov/pubmed/32368356
http://dx.doi.org/10.1016/j.jare.2020.04.005
_version_ 1783526977010925568
author Das, Reena
Datta, Saikat
Kaviraj, Anilava
Sanyal, Soumendra Nath
Nielsen, Peter
Nielsen, Izabela
Sharma, Prashant
Sanyal, Tanmay
Dey, Kartick
Saha, Subrata
author_facet Das, Reena
Datta, Saikat
Kaviraj, Anilava
Sanyal, Soumendra Nath
Nielsen, Peter
Nielsen, Izabela
Sharma, Prashant
Sanyal, Tanmay
Dey, Kartick
Saha, Subrata
author_sort Das, Reena
collection PubMed
description The most effective way to combat β-thalassemias is to prevent the birth of children with thalassemia major. Therefore, a cost-effective screening method is essential to identify β-thalassemia traits (BTT) and differentiate normal individuals from carriers. We considered five hematological parameters to formulate two separate scoring mechanisms, one for BTT detection, and another for joint determination of hemoglobin E (HbE) trait and BTT by employing decision trees, Naïve Bayes classifier, and Artificial neural network frameworks on data collected from the Postgraduate Institute of Medical Education and Research, Chandigarh, India. We validated both the scores on two different data sets and found 100% sensitivity of both the scores with their respective threshold values. The results revealed the specificity of the screening scores to be 79.25% and 91.74% for BTT and 58.62% and 78.03% for the joint score of HbE and BTT, respectively. A lower Youden’s index was measured for the two scores compared to some existing indices. Therefore, the proposed scores can obviate a large portion of the population from expensive high-performance liquid chromatography (HPLC) analysis during the screening of BTT, and joint determination of BTT and HbE, respectively, thereby saving significant resources and cost currently being utilized for screening purpose.
format Online
Article
Text
id pubmed-7186556
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-71865562020-05-04 A decision support scheme for beta thalassemia and HbE carrier screening Das, Reena Datta, Saikat Kaviraj, Anilava Sanyal, Soumendra Nath Nielsen, Peter Nielsen, Izabela Sharma, Prashant Sanyal, Tanmay Dey, Kartick Saha, Subrata J Adv Res Article The most effective way to combat β-thalassemias is to prevent the birth of children with thalassemia major. Therefore, a cost-effective screening method is essential to identify β-thalassemia traits (BTT) and differentiate normal individuals from carriers. We considered five hematological parameters to formulate two separate scoring mechanisms, one for BTT detection, and another for joint determination of hemoglobin E (HbE) trait and BTT by employing decision trees, Naïve Bayes classifier, and Artificial neural network frameworks on data collected from the Postgraduate Institute of Medical Education and Research, Chandigarh, India. We validated both the scores on two different data sets and found 100% sensitivity of both the scores with their respective threshold values. The results revealed the specificity of the screening scores to be 79.25% and 91.74% for BTT and 58.62% and 78.03% for the joint score of HbE and BTT, respectively. A lower Youden’s index was measured for the two scores compared to some existing indices. Therefore, the proposed scores can obviate a large portion of the population from expensive high-performance liquid chromatography (HPLC) analysis during the screening of BTT, and joint determination of BTT and HbE, respectively, thereby saving significant resources and cost currently being utilized for screening purpose. Elsevier 2020-04-24 /pmc/articles/PMC7186556/ /pubmed/32368356 http://dx.doi.org/10.1016/j.jare.2020.04.005 Text en © 2020 THE AUTHORS. Published by Elsevier BV on behalf of Cairo University. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Das, Reena
Datta, Saikat
Kaviraj, Anilava
Sanyal, Soumendra Nath
Nielsen, Peter
Nielsen, Izabela
Sharma, Prashant
Sanyal, Tanmay
Dey, Kartick
Saha, Subrata
A decision support scheme for beta thalassemia and HbE carrier screening
title A decision support scheme for beta thalassemia and HbE carrier screening
title_full A decision support scheme for beta thalassemia and HbE carrier screening
title_fullStr A decision support scheme for beta thalassemia and HbE carrier screening
title_full_unstemmed A decision support scheme for beta thalassemia and HbE carrier screening
title_short A decision support scheme for beta thalassemia and HbE carrier screening
title_sort decision support scheme for beta thalassemia and hbe carrier screening
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7186556/
https://www.ncbi.nlm.nih.gov/pubmed/32368356
http://dx.doi.org/10.1016/j.jare.2020.04.005
work_keys_str_mv AT dasreena adecisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT dattasaikat adecisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT kavirajanilava adecisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT sanyalsoumendranath adecisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT nielsenpeter adecisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT nielsenizabela adecisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT sharmaprashant adecisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT sanyaltanmay adecisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT deykartick adecisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT sahasubrata adecisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT dasreena decisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT dattasaikat decisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT kavirajanilava decisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT sanyalsoumendranath decisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT nielsenpeter decisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT nielsenizabela decisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT sharmaprashant decisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT sanyaltanmay decisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT deykartick decisionsupportschemeforbetathalassemiaandhbecarrierscreening
AT sahasubrata decisionsupportschemeforbetathalassemiaandhbecarrierscreening