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A decision support scheme for beta thalassemia and HbE carrier screening
The most effective way to combat β-thalassemias is to prevent the birth of children with thalassemia major. Therefore, a cost-effective screening method is essential to identify β-thalassemia traits (BTT) and differentiate normal individuals from carriers. We considered five hematological parameters...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7186556/ https://www.ncbi.nlm.nih.gov/pubmed/32368356 http://dx.doi.org/10.1016/j.jare.2020.04.005 |
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author | Das, Reena Datta, Saikat Kaviraj, Anilava Sanyal, Soumendra Nath Nielsen, Peter Nielsen, Izabela Sharma, Prashant Sanyal, Tanmay Dey, Kartick Saha, Subrata |
author_facet | Das, Reena Datta, Saikat Kaviraj, Anilava Sanyal, Soumendra Nath Nielsen, Peter Nielsen, Izabela Sharma, Prashant Sanyal, Tanmay Dey, Kartick Saha, Subrata |
author_sort | Das, Reena |
collection | PubMed |
description | The most effective way to combat β-thalassemias is to prevent the birth of children with thalassemia major. Therefore, a cost-effective screening method is essential to identify β-thalassemia traits (BTT) and differentiate normal individuals from carriers. We considered five hematological parameters to formulate two separate scoring mechanisms, one for BTT detection, and another for joint determination of hemoglobin E (HbE) trait and BTT by employing decision trees, Naïve Bayes classifier, and Artificial neural network frameworks on data collected from the Postgraduate Institute of Medical Education and Research, Chandigarh, India. We validated both the scores on two different data sets and found 100% sensitivity of both the scores with their respective threshold values. The results revealed the specificity of the screening scores to be 79.25% and 91.74% for BTT and 58.62% and 78.03% for the joint score of HbE and BTT, respectively. A lower Youden’s index was measured for the two scores compared to some existing indices. Therefore, the proposed scores can obviate a large portion of the population from expensive high-performance liquid chromatography (HPLC) analysis during the screening of BTT, and joint determination of BTT and HbE, respectively, thereby saving significant resources and cost currently being utilized for screening purpose. |
format | Online Article Text |
id | pubmed-7186556 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-71865562020-05-04 A decision support scheme for beta thalassemia and HbE carrier screening Das, Reena Datta, Saikat Kaviraj, Anilava Sanyal, Soumendra Nath Nielsen, Peter Nielsen, Izabela Sharma, Prashant Sanyal, Tanmay Dey, Kartick Saha, Subrata J Adv Res Article The most effective way to combat β-thalassemias is to prevent the birth of children with thalassemia major. Therefore, a cost-effective screening method is essential to identify β-thalassemia traits (BTT) and differentiate normal individuals from carriers. We considered five hematological parameters to formulate two separate scoring mechanisms, one for BTT detection, and another for joint determination of hemoglobin E (HbE) trait and BTT by employing decision trees, Naïve Bayes classifier, and Artificial neural network frameworks on data collected from the Postgraduate Institute of Medical Education and Research, Chandigarh, India. We validated both the scores on two different data sets and found 100% sensitivity of both the scores with their respective threshold values. The results revealed the specificity of the screening scores to be 79.25% and 91.74% for BTT and 58.62% and 78.03% for the joint score of HbE and BTT, respectively. A lower Youden’s index was measured for the two scores compared to some existing indices. Therefore, the proposed scores can obviate a large portion of the population from expensive high-performance liquid chromatography (HPLC) analysis during the screening of BTT, and joint determination of BTT and HbE, respectively, thereby saving significant resources and cost currently being utilized for screening purpose. Elsevier 2020-04-24 /pmc/articles/PMC7186556/ /pubmed/32368356 http://dx.doi.org/10.1016/j.jare.2020.04.005 Text en © 2020 THE AUTHORS. Published by Elsevier BV on behalf of Cairo University. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Das, Reena Datta, Saikat Kaviraj, Anilava Sanyal, Soumendra Nath Nielsen, Peter Nielsen, Izabela Sharma, Prashant Sanyal, Tanmay Dey, Kartick Saha, Subrata A decision support scheme for beta thalassemia and HbE carrier screening |
title | A decision support scheme for beta thalassemia and HbE carrier screening |
title_full | A decision support scheme for beta thalassemia and HbE carrier screening |
title_fullStr | A decision support scheme for beta thalassemia and HbE carrier screening |
title_full_unstemmed | A decision support scheme for beta thalassemia and HbE carrier screening |
title_short | A decision support scheme for beta thalassemia and HbE carrier screening |
title_sort | decision support scheme for beta thalassemia and hbe carrier screening |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7186556/ https://www.ncbi.nlm.nih.gov/pubmed/32368356 http://dx.doi.org/10.1016/j.jare.2020.04.005 |
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