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Circular RNA expression profile of lung squamous cell carcinoma: identification of potential biomarkers and therapeutic targets
Emerging evidences indicated that exosomal circular RNAs (circRNAs) could serve as diagnostic biomarkers for cancers. However, the expression profiles and clinical significance of circRNAs in lung squamous cell carcinoma (LUSC) remain largely unknown. Herein, we analyzed circRNAs expression profile...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Portland Press Ltd.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7189478/ https://www.ncbi.nlm.nih.gov/pubmed/32309852 http://dx.doi.org/10.1042/BSR20194512 |
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author | Wang, Yawei Zhang, Haiyan Wang, Jian Li, Bei Wang, Xiuwen |
author_facet | Wang, Yawei Zhang, Haiyan Wang, Jian Li, Bei Wang, Xiuwen |
author_sort | Wang, Yawei |
collection | PubMed |
description | Emerging evidences indicated that exosomal circular RNAs (circRNAs) could serve as diagnostic biomarkers for cancers. However, the expression profiles and clinical significance of circRNAs in lung squamous cell carcinoma (LUSC) remain largely unknown. Herein, we analyzed circRNAs expression profile in six pairs of plasma exosome samples of LUSC patients using high-throughput sequencing. A total of 252 differentially expressed exosomal circRNAs were identified, including 133 up-regulated circRNAs and 119 down-regulated circRNAs. Subsequently, the circRNAs–miRNAs–mRNAs interaction network was built to investigate potential function of circRNAs. Three up-regulated circRNAs (hsa_circ_0014235, hsa_circ_0025580 and hsa_circ_0026403) were implied to participate in cancer-related pathways. QRT-PCR experiment confirmed the up-regulation of hsa_circ_0014235 and hsa_circ_0025580. Finally, clinical studies indicated that hsa_circ_0014235 and hsa_circ_0025580 could serve as novel diagnostic biomarkers for LUSC. Taken together, our study revealed exosomal circRNAs expression profile in LUSC for the first time and showed the important diagnostic potential for circRNAs in LUSC. |
format | Online Article Text |
id | pubmed-7189478 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Portland Press Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-71894782020-05-06 Circular RNA expression profile of lung squamous cell carcinoma: identification of potential biomarkers and therapeutic targets Wang, Yawei Zhang, Haiyan Wang, Jian Li, Bei Wang, Xiuwen Biosci Rep Bioinformatics Emerging evidences indicated that exosomal circular RNAs (circRNAs) could serve as diagnostic biomarkers for cancers. However, the expression profiles and clinical significance of circRNAs in lung squamous cell carcinoma (LUSC) remain largely unknown. Herein, we analyzed circRNAs expression profile in six pairs of plasma exosome samples of LUSC patients using high-throughput sequencing. A total of 252 differentially expressed exosomal circRNAs were identified, including 133 up-regulated circRNAs and 119 down-regulated circRNAs. Subsequently, the circRNAs–miRNAs–mRNAs interaction network was built to investigate potential function of circRNAs. Three up-regulated circRNAs (hsa_circ_0014235, hsa_circ_0025580 and hsa_circ_0026403) were implied to participate in cancer-related pathways. QRT-PCR experiment confirmed the up-regulation of hsa_circ_0014235 and hsa_circ_0025580. Finally, clinical studies indicated that hsa_circ_0014235 and hsa_circ_0025580 could serve as novel diagnostic biomarkers for LUSC. Taken together, our study revealed exosomal circRNAs expression profile in LUSC for the first time and showed the important diagnostic potential for circRNAs in LUSC. Portland Press Ltd. 2020-04-28 /pmc/articles/PMC7189478/ /pubmed/32309852 http://dx.doi.org/10.1042/BSR20194512 Text en © 2020 The Author(s). https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY). |
spellingShingle | Bioinformatics Wang, Yawei Zhang, Haiyan Wang, Jian Li, Bei Wang, Xiuwen Circular RNA expression profile of lung squamous cell carcinoma: identification of potential biomarkers and therapeutic targets |
title | Circular RNA expression profile of lung squamous cell carcinoma: identification of potential biomarkers and therapeutic targets |
title_full | Circular RNA expression profile of lung squamous cell carcinoma: identification of potential biomarkers and therapeutic targets |
title_fullStr | Circular RNA expression profile of lung squamous cell carcinoma: identification of potential biomarkers and therapeutic targets |
title_full_unstemmed | Circular RNA expression profile of lung squamous cell carcinoma: identification of potential biomarkers and therapeutic targets |
title_short | Circular RNA expression profile of lung squamous cell carcinoma: identification of potential biomarkers and therapeutic targets |
title_sort | circular rna expression profile of lung squamous cell carcinoma: identification of potential biomarkers and therapeutic targets |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7189478/ https://www.ncbi.nlm.nih.gov/pubmed/32309852 http://dx.doi.org/10.1042/BSR20194512 |
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