Cargando…
Assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning
Tumor budding is a promising and cost-effective biomarker with strong prognostic value in colorectal cancer. However, challenges related to interobserver variability persist. Such variability may be reduced by immunohistochemistry and computer-aided tumor bud selection. Development of computer algor...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group US
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7190566/ https://www.ncbi.nlm.nih.gov/pubmed/31844269 http://dx.doi.org/10.1038/s41379-019-0434-2 |
_version_ | 1783527707472035840 |
---|---|
author | Bokhorst, J. M. Blank, A. Lugli, A. Zlobec, I. Dawson, H. Vieth, M. Rijstenberg, L. L. Brockmoeller, S. Urbanowicz, M. Flejou, J. F. Kirsch, R. Ciompi, F. van der Laak, J. A. W. M. Nagtegaal, I. D. |
author_facet | Bokhorst, J. M. Blank, A. Lugli, A. Zlobec, I. Dawson, H. Vieth, M. Rijstenberg, L. L. Brockmoeller, S. Urbanowicz, M. Flejou, J. F. Kirsch, R. Ciompi, F. van der Laak, J. A. W. M. Nagtegaal, I. D. |
author_sort | Bokhorst, J. M. |
collection | PubMed |
description | Tumor budding is a promising and cost-effective biomarker with strong prognostic value in colorectal cancer. However, challenges related to interobserver variability persist. Such variability may be reduced by immunohistochemistry and computer-aided tumor bud selection. Development of computer algorithms for this purpose requires unequivocal examples of individual tumor buds. As such, we undertook a large-scale, international, and digital observer study on individual tumor bud assessment. From a pool of 46 colorectal cancer cases with tumor budding, 3000 tumor bud candidates were selected, largely based on digital image analysis algorithms. For each candidate bud, an image patch (size 256 × 256 µm) was extracted from a pan cytokeratin-stained whole-slide image. Members of an International Tumor Budding Consortium (n = 7) were asked to categorize each candidate as either (1) tumor bud, (2) poorly differentiated cluster, or (3) neither, based on current definitions. Agreement was assessed with Cohen’s and Fleiss Kappa statistics. Fleiss Kappa showed moderate overall agreement between observers (0.42 and 0.51), while Cohen’s Kappas ranged from 0.25 to 0.63. Complete agreement by all seven observers was present for only 34% of the 3000 tumor bud candidates, while 59% of the candidates were agreed on by at least five of the seven observers. Despite reports of moderate-to-substantial agreement with respect to tumor budding grade, agreement with respect to individual pan cytokeratin-stained tumor buds is moderate at most. A machine learning approach may prove especially useful for a more robust assessment of individual tumor buds. |
format | Online Article Text |
id | pubmed-7190566 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group US |
record_format | MEDLINE/PubMed |
spelling | pubmed-71905662020-05-04 Assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning Bokhorst, J. M. Blank, A. Lugli, A. Zlobec, I. Dawson, H. Vieth, M. Rijstenberg, L. L. Brockmoeller, S. Urbanowicz, M. Flejou, J. F. Kirsch, R. Ciompi, F. van der Laak, J. A. W. M. Nagtegaal, I. D. Mod Pathol Article Tumor budding is a promising and cost-effective biomarker with strong prognostic value in colorectal cancer. However, challenges related to interobserver variability persist. Such variability may be reduced by immunohistochemistry and computer-aided tumor bud selection. Development of computer algorithms for this purpose requires unequivocal examples of individual tumor buds. As such, we undertook a large-scale, international, and digital observer study on individual tumor bud assessment. From a pool of 46 colorectal cancer cases with tumor budding, 3000 tumor bud candidates were selected, largely based on digital image analysis algorithms. For each candidate bud, an image patch (size 256 × 256 µm) was extracted from a pan cytokeratin-stained whole-slide image. Members of an International Tumor Budding Consortium (n = 7) were asked to categorize each candidate as either (1) tumor bud, (2) poorly differentiated cluster, or (3) neither, based on current definitions. Agreement was assessed with Cohen’s and Fleiss Kappa statistics. Fleiss Kappa showed moderate overall agreement between observers (0.42 and 0.51), while Cohen’s Kappas ranged from 0.25 to 0.63. Complete agreement by all seven observers was present for only 34% of the 3000 tumor bud candidates, while 59% of the candidates were agreed on by at least five of the seven observers. Despite reports of moderate-to-substantial agreement with respect to tumor budding grade, agreement with respect to individual pan cytokeratin-stained tumor buds is moderate at most. A machine learning approach may prove especially useful for a more robust assessment of individual tumor buds. Nature Publishing Group US 2019-12-16 2020 /pmc/articles/PMC7190566/ /pubmed/31844269 http://dx.doi.org/10.1038/s41379-019-0434-2 Text en © The Author(s) 2019, corrected publication January 2020 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Bokhorst, J. M. Blank, A. Lugli, A. Zlobec, I. Dawson, H. Vieth, M. Rijstenberg, L. L. Brockmoeller, S. Urbanowicz, M. Flejou, J. F. Kirsch, R. Ciompi, F. van der Laak, J. A. W. M. Nagtegaal, I. D. Assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning |
title | Assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning |
title_full | Assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning |
title_fullStr | Assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning |
title_full_unstemmed | Assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning |
title_short | Assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning |
title_sort | assessment of individual tumor buds using keratin immunohistochemistry: moderate interobserver agreement suggests a role for machine learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7190566/ https://www.ncbi.nlm.nih.gov/pubmed/31844269 http://dx.doi.org/10.1038/s41379-019-0434-2 |
work_keys_str_mv | AT bokhorstjm assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT blanka assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT luglia assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT zlobeci assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT dawsonh assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT viethm assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT rijstenbergll assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT brockmoellers assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT urbanowiczm assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT flejoujf assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT kirschr assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT ciompif assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT vanderlaakjawm assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning AT nagtegaalid assessmentofindividualtumorbudsusingkeratinimmunohistochemistrymoderateinterobserveragreementsuggestsaroleformachinelearning |