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Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO
The Baeg-nyong cave is a limestone cave which has been nominated as the first critical zone observatory (CZO) in South Korea. Moonmilk is a well-known speleothem composed of various carbonate minerals. To characterize moonmilk from the Baeg-nyong cave, we performed mineralogical analyses and applied...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7190796/ https://www.ncbi.nlm.nih.gov/pubmed/32390967 http://dx.doi.org/10.3389/fmicb.2020.00613 |
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author | Park, Shinae Cho, Yong-Joon Jung, Da-yea Jo, Kyung-nam Lee, Eun-Jin Lee, Jung-Shin |
author_facet | Park, Shinae Cho, Yong-Joon Jung, Da-yea Jo, Kyung-nam Lee, Eun-Jin Lee, Jung-Shin |
author_sort | Park, Shinae |
collection | PubMed |
description | The Baeg-nyong cave is a limestone cave which has been nominated as the first critical zone observatory (CZO) in South Korea. Moonmilk is a well-known speleothem composed of various carbonate minerals. To characterize moonmilk from the Baeg-nyong cave, we performed mineralogical analyses and applied high-throughput 16S rRNA gene sequencing to analyze the microbial communities, including bacteria and fungi, of dry and wet moonmilk samples. The results showed that the dry and wet moonmilk samples had different and atypical crystal structures, although they were predominantly composed of CaCO(3). Furthermore, metagenomic data revealed that the dry and wet moonmilk samples collected from an oligotrophic environment had completely different bacterial communities when compared to the outside soil, and there was a difference in bacterial communities even between dry and wet moonmilk specimens. Fungal communities, however, did not differ significantly between dry and wet moonmilk samples. This study is the first metagenomic analysis of two different types of moonmilk with different physical properties and the first report on the microbial diversity of moonmilk from a cave in the first CZO in South Korea. |
format | Online Article Text |
id | pubmed-7190796 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-71907962020-05-08 Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO Park, Shinae Cho, Yong-Joon Jung, Da-yea Jo, Kyung-nam Lee, Eun-Jin Lee, Jung-Shin Front Microbiol Microbiology The Baeg-nyong cave is a limestone cave which has been nominated as the first critical zone observatory (CZO) in South Korea. Moonmilk is a well-known speleothem composed of various carbonate minerals. To characterize moonmilk from the Baeg-nyong cave, we performed mineralogical analyses and applied high-throughput 16S rRNA gene sequencing to analyze the microbial communities, including bacteria and fungi, of dry and wet moonmilk samples. The results showed that the dry and wet moonmilk samples had different and atypical crystal structures, although they were predominantly composed of CaCO(3). Furthermore, metagenomic data revealed that the dry and wet moonmilk samples collected from an oligotrophic environment had completely different bacterial communities when compared to the outside soil, and there was a difference in bacterial communities even between dry and wet moonmilk specimens. Fungal communities, however, did not differ significantly between dry and wet moonmilk samples. This study is the first metagenomic analysis of two different types of moonmilk with different physical properties and the first report on the microbial diversity of moonmilk from a cave in the first CZO in South Korea. Frontiers Media S.A. 2020-04-23 /pmc/articles/PMC7190796/ /pubmed/32390967 http://dx.doi.org/10.3389/fmicb.2020.00613 Text en Copyright © 2020 Park, Cho, Jung, Jo, Lee and Lee. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Park, Shinae Cho, Yong-Joon Jung, Da-yea Jo, Kyung-nam Lee, Eun-Jin Lee, Jung-Shin Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO |
title | Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO |
title_full | Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO |
title_fullStr | Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO |
title_full_unstemmed | Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO |
title_short | Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO |
title_sort | microbial diversity in moonmilk of baeg-nyong cave, korean czo |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7190796/ https://www.ncbi.nlm.nih.gov/pubmed/32390967 http://dx.doi.org/10.3389/fmicb.2020.00613 |
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