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Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO

The Baeg-nyong cave is a limestone cave which has been nominated as the first critical zone observatory (CZO) in South Korea. Moonmilk is a well-known speleothem composed of various carbonate minerals. To characterize moonmilk from the Baeg-nyong cave, we performed mineralogical analyses and applied...

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Autores principales: Park, Shinae, Cho, Yong-Joon, Jung, Da-yea, Jo, Kyung-nam, Lee, Eun-Jin, Lee, Jung-Shin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7190796/
https://www.ncbi.nlm.nih.gov/pubmed/32390967
http://dx.doi.org/10.3389/fmicb.2020.00613
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author Park, Shinae
Cho, Yong-Joon
Jung, Da-yea
Jo, Kyung-nam
Lee, Eun-Jin
Lee, Jung-Shin
author_facet Park, Shinae
Cho, Yong-Joon
Jung, Da-yea
Jo, Kyung-nam
Lee, Eun-Jin
Lee, Jung-Shin
author_sort Park, Shinae
collection PubMed
description The Baeg-nyong cave is a limestone cave which has been nominated as the first critical zone observatory (CZO) in South Korea. Moonmilk is a well-known speleothem composed of various carbonate minerals. To characterize moonmilk from the Baeg-nyong cave, we performed mineralogical analyses and applied high-throughput 16S rRNA gene sequencing to analyze the microbial communities, including bacteria and fungi, of dry and wet moonmilk samples. The results showed that the dry and wet moonmilk samples had different and atypical crystal structures, although they were predominantly composed of CaCO(3). Furthermore, metagenomic data revealed that the dry and wet moonmilk samples collected from an oligotrophic environment had completely different bacterial communities when compared to the outside soil, and there was a difference in bacterial communities even between dry and wet moonmilk specimens. Fungal communities, however, did not differ significantly between dry and wet moonmilk samples. This study is the first metagenomic analysis of two different types of moonmilk with different physical properties and the first report on the microbial diversity of moonmilk from a cave in the first CZO in South Korea.
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spelling pubmed-71907962020-05-08 Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO Park, Shinae Cho, Yong-Joon Jung, Da-yea Jo, Kyung-nam Lee, Eun-Jin Lee, Jung-Shin Front Microbiol Microbiology The Baeg-nyong cave is a limestone cave which has been nominated as the first critical zone observatory (CZO) in South Korea. Moonmilk is a well-known speleothem composed of various carbonate minerals. To characterize moonmilk from the Baeg-nyong cave, we performed mineralogical analyses and applied high-throughput 16S rRNA gene sequencing to analyze the microbial communities, including bacteria and fungi, of dry and wet moonmilk samples. The results showed that the dry and wet moonmilk samples had different and atypical crystal structures, although they were predominantly composed of CaCO(3). Furthermore, metagenomic data revealed that the dry and wet moonmilk samples collected from an oligotrophic environment had completely different bacterial communities when compared to the outside soil, and there was a difference in bacterial communities even between dry and wet moonmilk specimens. Fungal communities, however, did not differ significantly between dry and wet moonmilk samples. This study is the first metagenomic analysis of two different types of moonmilk with different physical properties and the first report on the microbial diversity of moonmilk from a cave in the first CZO in South Korea. Frontiers Media S.A. 2020-04-23 /pmc/articles/PMC7190796/ /pubmed/32390967 http://dx.doi.org/10.3389/fmicb.2020.00613 Text en Copyright © 2020 Park, Cho, Jung, Jo, Lee and Lee. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Park, Shinae
Cho, Yong-Joon
Jung, Da-yea
Jo, Kyung-nam
Lee, Eun-Jin
Lee, Jung-Shin
Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO
title Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO
title_full Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO
title_fullStr Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO
title_full_unstemmed Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO
title_short Microbial Diversity in Moonmilk of Baeg-nyong Cave, Korean CZO
title_sort microbial diversity in moonmilk of baeg-nyong cave, korean czo
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7190796/
https://www.ncbi.nlm.nih.gov/pubmed/32390967
http://dx.doi.org/10.3389/fmicb.2020.00613
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