Cargando…
SpatialCPie: an R/Bioconductor package for spatial transcriptomics cluster evaluation
BACKGROUND: Technological developments in the emerging field of spatial transcriptomics have opened up an unexplored landscape where transcript information is put in a spatial context. Clustering commonly constitutes a central component in analyzing this type of data. However, deciding on the number...
Autores principales: | Bergenstråhle, Joseph, Bergenstråhle, Ludvig, Lundeberg, Joakim |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7191678/ https://www.ncbi.nlm.nih.gov/pubmed/32349652 http://dx.doi.org/10.1186/s12859-020-3489-7 |
Ejemplares similares
-
Seamless integration of image and molecular analysis for spatial transcriptomics workflows
por: Bergenstråhle, Joseph, et al.
Publicado: (2020) -
Single-cell and spatial transcriptomics enables probabilistic inference of cell type topography
por: Andersson, Alma, et al.
Publicado: (2020) -
spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data
por: Pardo, Brenda, et al.
Publicado: (2022) -
Automation of Spatial Transcriptomics library preparation to enable rapid and robust insights into spatial organization of tissues
por: Berglund, Emelie, et al.
Publicado: (2020) -
GSAR: Bioconductor package for Gene Set analysis in R
por: Rahmatallah, Yasir, et al.
Publicado: (2017)