Cargando…

CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila

Kinases and phosphatases are crucial for cellular processes and animal development. Various sets of resources in Drosophila have contributed significantly to the identification of kinases, phosphatases and their regulators. However, there are still many kinases, phosphatases and associate genes with...

Descripción completa

Detalles Bibliográficos
Autores principales: Wu, Menghua, Zhang, Xuedi, Wei, Wei, Long, Li, An, Sainan, Gao, Guanjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7193564/
https://www.ncbi.nlm.nih.gov/pubmed/32355295
http://dx.doi.org/10.1038/s41598-020-64253-4
_version_ 1783528217201606656
author Wu, Menghua
Zhang, Xuedi
Wei, Wei
Long, Li
An, Sainan
Gao, Guanjun
author_facet Wu, Menghua
Zhang, Xuedi
Wei, Wei
Long, Li
An, Sainan
Gao, Guanjun
author_sort Wu, Menghua
collection PubMed
description Kinases and phosphatases are crucial for cellular processes and animal development. Various sets of resources in Drosophila have contributed significantly to the identification of kinases, phosphatases and their regulators. However, there are still many kinases, phosphatases and associate genes with unknown functions in the Drosophila genome. In this study, we utilized a CRISPR/Cas9 strategy to generate stable mutants for these unknown kinases, phosphatases and associate factors in Drosophila. For all the 156 unknown gene loci, we totally obtained 385 mutant alleles of 105 candidates, with 18 failure due to low efficiency of selected gRNAs and other 33 failure due to few recovered F0, which indicated high probability of lethal genes. From all the 105 mutated genes, we observed 9 whose mutants were lethal and another 4 sterile, most of which with human orthologs referred in OMIM, representing their huge value for human disease research. Here, we deliver these mutants as an open resource for more interesting studies.
format Online
Article
Text
id pubmed-7193564
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-71935642020-05-08 CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila Wu, Menghua Zhang, Xuedi Wei, Wei Long, Li An, Sainan Gao, Guanjun Sci Rep Article Kinases and phosphatases are crucial for cellular processes and animal development. Various sets of resources in Drosophila have contributed significantly to the identification of kinases, phosphatases and their regulators. However, there are still many kinases, phosphatases and associate genes with unknown functions in the Drosophila genome. In this study, we utilized a CRISPR/Cas9 strategy to generate stable mutants for these unknown kinases, phosphatases and associate factors in Drosophila. For all the 156 unknown gene loci, we totally obtained 385 mutant alleles of 105 candidates, with 18 failure due to low efficiency of selected gRNAs and other 33 failure due to few recovered F0, which indicated high probability of lethal genes. From all the 105 mutated genes, we observed 9 whose mutants were lethal and another 4 sterile, most of which with human orthologs referred in OMIM, representing their huge value for human disease research. Here, we deliver these mutants as an open resource for more interesting studies. Nature Publishing Group UK 2020-04-30 /pmc/articles/PMC7193564/ /pubmed/32355295 http://dx.doi.org/10.1038/s41598-020-64253-4 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Wu, Menghua
Zhang, Xuedi
Wei, Wei
Long, Li
An, Sainan
Gao, Guanjun
CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila
title CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila
title_full CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila
title_fullStr CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila
title_full_unstemmed CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila
title_short CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila
title_sort crispr/cas9 mediated genetic resource for unknown kinase and phosphatase genes in drosophila
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7193564/
https://www.ncbi.nlm.nih.gov/pubmed/32355295
http://dx.doi.org/10.1038/s41598-020-64253-4
work_keys_str_mv AT wumenghua crisprcas9mediatedgeneticresourceforunknownkinaseandphosphatasegenesindrosophila
AT zhangxuedi crisprcas9mediatedgeneticresourceforunknownkinaseandphosphatasegenesindrosophila
AT weiwei crisprcas9mediatedgeneticresourceforunknownkinaseandphosphatasegenesindrosophila
AT longli crisprcas9mediatedgeneticresourceforunknownkinaseandphosphatasegenesindrosophila
AT ansainan crisprcas9mediatedgeneticresourceforunknownkinaseandphosphatasegenesindrosophila
AT gaoguanjun crisprcas9mediatedgeneticresourceforunknownkinaseandphosphatasegenesindrosophila