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Nested structure of intraspecific competition network in Carnobacterium maltaromaticum

While competition targeting food-borne pathogens is being widely documented, few studies have focused on competition among non-pathogenic food bacteria. Carnobacterium maltaromaticum is a genetically diverse lactic acid bacterium known for comprising several bacteriocinogenic strains with bioprotect...

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Autores principales: Ramia, Nancy E., Mangavel, Cécile, Gaiani, Claire, Muller-Gueudin, Aurélie, Taha, Samir, Revol-Junelles, Anne-Marie, Borges, Frédéric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7193615/
https://www.ncbi.nlm.nih.gov/pubmed/32355239
http://dx.doi.org/10.1038/s41598-020-63844-5
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author Ramia, Nancy E.
Mangavel, Cécile
Gaiani, Claire
Muller-Gueudin, Aurélie
Taha, Samir
Revol-Junelles, Anne-Marie
Borges, Frédéric
author_facet Ramia, Nancy E.
Mangavel, Cécile
Gaiani, Claire
Muller-Gueudin, Aurélie
Taha, Samir
Revol-Junelles, Anne-Marie
Borges, Frédéric
author_sort Ramia, Nancy E.
collection PubMed
description While competition targeting food-borne pathogens is being widely documented, few studies have focused on competition among non-pathogenic food bacteria. Carnobacterium maltaromaticum is a genetically diverse lactic acid bacterium known for comprising several bacteriocinogenic strains with bioprotective potentialities against the food-borne pathogen Listeria monocytogenes. The aim of our study is to examine the network properties of competition among a collection of 73 strains of C. maltaromaticum and to characterize their individual interaction potential. The performed high-throughput competition assays, investigating 5 329 pairwise interactions, showed that intraspecific competition was major in C. maltaromaticum with approximately 56% of the sender strains antagonizing at least one receiver strain. A high diversity of inhibitory and sensitivity spectra was identified along with a majority of narrow inhibitory as well as sensitivity spectra. Through network analysis approach, we determined the highly nested architecture of C. maltaromaticum competition network, thus showing that competition in this species is determined by both the spectrum width of the inhibitory activity of sender strains and the spectrum width of the sensitivity of receiver strains. This study provides knowledge of the competition network in C. maltaromaticum that could be used in rational assembly of compatible microbial strains for the design of mixed starter cultures.
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spelling pubmed-71936152020-05-08 Nested structure of intraspecific competition network in Carnobacterium maltaromaticum Ramia, Nancy E. Mangavel, Cécile Gaiani, Claire Muller-Gueudin, Aurélie Taha, Samir Revol-Junelles, Anne-Marie Borges, Frédéric Sci Rep Article While competition targeting food-borne pathogens is being widely documented, few studies have focused on competition among non-pathogenic food bacteria. Carnobacterium maltaromaticum is a genetically diverse lactic acid bacterium known for comprising several bacteriocinogenic strains with bioprotective potentialities against the food-borne pathogen Listeria monocytogenes. The aim of our study is to examine the network properties of competition among a collection of 73 strains of C. maltaromaticum and to characterize their individual interaction potential. The performed high-throughput competition assays, investigating 5 329 pairwise interactions, showed that intraspecific competition was major in C. maltaromaticum with approximately 56% of the sender strains antagonizing at least one receiver strain. A high diversity of inhibitory and sensitivity spectra was identified along with a majority of narrow inhibitory as well as sensitivity spectra. Through network analysis approach, we determined the highly nested architecture of C. maltaromaticum competition network, thus showing that competition in this species is determined by both the spectrum width of the inhibitory activity of sender strains and the spectrum width of the sensitivity of receiver strains. This study provides knowledge of the competition network in C. maltaromaticum that could be used in rational assembly of compatible microbial strains for the design of mixed starter cultures. Nature Publishing Group UK 2020-04-30 /pmc/articles/PMC7193615/ /pubmed/32355239 http://dx.doi.org/10.1038/s41598-020-63844-5 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Ramia, Nancy E.
Mangavel, Cécile
Gaiani, Claire
Muller-Gueudin, Aurélie
Taha, Samir
Revol-Junelles, Anne-Marie
Borges, Frédéric
Nested structure of intraspecific competition network in Carnobacterium maltaromaticum
title Nested structure of intraspecific competition network in Carnobacterium maltaromaticum
title_full Nested structure of intraspecific competition network in Carnobacterium maltaromaticum
title_fullStr Nested structure of intraspecific competition network in Carnobacterium maltaromaticum
title_full_unstemmed Nested structure of intraspecific competition network in Carnobacterium maltaromaticum
title_short Nested structure of intraspecific competition network in Carnobacterium maltaromaticum
title_sort nested structure of intraspecific competition network in carnobacterium maltaromaticum
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7193615/
https://www.ncbi.nlm.nih.gov/pubmed/32355239
http://dx.doi.org/10.1038/s41598-020-63844-5
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