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Cascading After Peridiagnostic Cancer Genetic Testing: An Alternative to Population-Based Screening
PURPOSE: Despite advances in DNA sequencing technology and expanded medical guidelines, the vast majority of individuals carrying pathogenic variants of common cancer susceptibility genes have yet to be identified. An alternative to population-wide genetic screening of healthy individuals would expl...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society of Clinical Oncology
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7193752/ https://www.ncbi.nlm.nih.gov/pubmed/31922925 http://dx.doi.org/10.1200/JCO.19.02010 |
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author | Offit, Kenneth Tkachuk, Kaitlyn A. Stadler, Zsofia K. Walsh, Michael F. Diaz-Zabala, Hector Levin, Jeffrey D. Steinsnyder, Zoe Ravichandran, Vignesh Sharaf, Ravi N. Frey, Melissa K. Lipkin, Steven M. Robson, Mark E. Hamilton, Jada G. Vijai, Joseph Mukherjee, Semanti |
author_facet | Offit, Kenneth Tkachuk, Kaitlyn A. Stadler, Zsofia K. Walsh, Michael F. Diaz-Zabala, Hector Levin, Jeffrey D. Steinsnyder, Zoe Ravichandran, Vignesh Sharaf, Ravi N. Frey, Melissa K. Lipkin, Steven M. Robson, Mark E. Hamilton, Jada G. Vijai, Joseph Mukherjee, Semanti |
author_sort | Offit, Kenneth |
collection | PubMed |
description | PURPOSE: Despite advances in DNA sequencing technology and expanded medical guidelines, the vast majority of individuals carrying pathogenic variants of common cancer susceptibility genes have yet to be identified. An alternative to population-wide genetic screening of healthy individuals would exploit the trend for genetic testing at the time of cancer diagnosis to guide therapy and prevention, combined with augmented familial diffusion or “cascade” of genomic risk information. METHODS: Using a multiple linear regression model, we derived the time interval to detect an estimated 3.9 million individuals in the United States with a pathogenic variant in 1 of 18 cancer susceptibility genes. We analyzed the impact of the proportion of incident patients sequenced, varying observed frequencies of pathogenic germline variants in patients with cancer, differential rates of diffusion of genetic information in families, and family size. RESULTS: The time to detect inherited cancer predisposing variants in the population is affected by the extent of cascade to first-, second-, and third-degree relatives (FDR, SDR, TDR, respectively), family size, prevalence of mutations in patients with cancer, and the proportion of patients with cancer sequenced. In a representative scenario, assuming a 7% prevalence of pathogenic variants across cancer types, an average family size of 3 per generation, and 15% of incident patients with cancer in the United States undergoing germline testing, the time to detect all 3.9 million individuals with pathogenic variants in 18 cancer susceptibility genes would be 46.2, 22.3, 13.6, and 9.9 years if 10%, 25%, 50%, and 70%, respectively, of all FDR, SDR, and TDR were tested for familial mutations. CONCLUSION: Peridiagnostic and cascade cancer genetic testing offers an alternative strategy to achieve population-wide identification of cancer susceptibility mutations. |
format | Online Article Text |
id | pubmed-7193752 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Society of Clinical Oncology |
record_format | MEDLINE/PubMed |
spelling | pubmed-71937522020-05-06 Cascading After Peridiagnostic Cancer Genetic Testing: An Alternative to Population-Based Screening Offit, Kenneth Tkachuk, Kaitlyn A. Stadler, Zsofia K. Walsh, Michael F. Diaz-Zabala, Hector Levin, Jeffrey D. Steinsnyder, Zoe Ravichandran, Vignesh Sharaf, Ravi N. Frey, Melissa K. Lipkin, Steven M. Robson, Mark E. Hamilton, Jada G. Vijai, Joseph Mukherjee, Semanti J Clin Oncol ORIGINAL REPORTS PURPOSE: Despite advances in DNA sequencing technology and expanded medical guidelines, the vast majority of individuals carrying pathogenic variants of common cancer susceptibility genes have yet to be identified. An alternative to population-wide genetic screening of healthy individuals would exploit the trend for genetic testing at the time of cancer diagnosis to guide therapy and prevention, combined with augmented familial diffusion or “cascade” of genomic risk information. METHODS: Using a multiple linear regression model, we derived the time interval to detect an estimated 3.9 million individuals in the United States with a pathogenic variant in 1 of 18 cancer susceptibility genes. We analyzed the impact of the proportion of incident patients sequenced, varying observed frequencies of pathogenic germline variants in patients with cancer, differential rates of diffusion of genetic information in families, and family size. RESULTS: The time to detect inherited cancer predisposing variants in the population is affected by the extent of cascade to first-, second-, and third-degree relatives (FDR, SDR, TDR, respectively), family size, prevalence of mutations in patients with cancer, and the proportion of patients with cancer sequenced. In a representative scenario, assuming a 7% prevalence of pathogenic variants across cancer types, an average family size of 3 per generation, and 15% of incident patients with cancer in the United States undergoing germline testing, the time to detect all 3.9 million individuals with pathogenic variants in 18 cancer susceptibility genes would be 46.2, 22.3, 13.6, and 9.9 years if 10%, 25%, 50%, and 70%, respectively, of all FDR, SDR, and TDR were tested for familial mutations. CONCLUSION: Peridiagnostic and cascade cancer genetic testing offers an alternative strategy to achieve population-wide identification of cancer susceptibility mutations. American Society of Clinical Oncology 2020-05-01 2020-01-10 /pmc/articles/PMC7193752/ /pubmed/31922925 http://dx.doi.org/10.1200/JCO.19.02010 Text en © 2020 by American Society of Clinical Oncology https://creativecommons.org/licenses/by/4.0/ Licensed under the Creative Commons Attribution 4.0 License: https://creativecommons.org/licenses/by/4.0/ |
spellingShingle | ORIGINAL REPORTS Offit, Kenneth Tkachuk, Kaitlyn A. Stadler, Zsofia K. Walsh, Michael F. Diaz-Zabala, Hector Levin, Jeffrey D. Steinsnyder, Zoe Ravichandran, Vignesh Sharaf, Ravi N. Frey, Melissa K. Lipkin, Steven M. Robson, Mark E. Hamilton, Jada G. Vijai, Joseph Mukherjee, Semanti Cascading After Peridiagnostic Cancer Genetic Testing: An Alternative to Population-Based Screening |
title | Cascading After Peridiagnostic Cancer Genetic Testing: An Alternative to Population-Based Screening |
title_full | Cascading After Peridiagnostic Cancer Genetic Testing: An Alternative to Population-Based Screening |
title_fullStr | Cascading After Peridiagnostic Cancer Genetic Testing: An Alternative to Population-Based Screening |
title_full_unstemmed | Cascading After Peridiagnostic Cancer Genetic Testing: An Alternative to Population-Based Screening |
title_short | Cascading After Peridiagnostic Cancer Genetic Testing: An Alternative to Population-Based Screening |
title_sort | cascading after peridiagnostic cancer genetic testing: an alternative to population-based screening |
topic | ORIGINAL REPORTS |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7193752/ https://www.ncbi.nlm.nih.gov/pubmed/31922925 http://dx.doi.org/10.1200/JCO.19.02010 |
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