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Machine Learning techniques in breast cancer prognosis prediction: A primary evaluation

More than 750 000 women in Italy are surviving a diagnosis of breast cancer. A large body of literature tells us which characteristics impact the most on their prognosis. However, the prediction of each disease course and then the establishment of a therapeutic plan and follow‐up tailored to the pat...

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Autores principales: Boeri, Carlo, Chiappa, Corrado, Galli, Federica, De Berardinis, Valentina, Bardelli, Laura, Carcano, Giulio, Rovera, Francesca
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7196042/
https://www.ncbi.nlm.nih.gov/pubmed/32154669
http://dx.doi.org/10.1002/cam4.2811
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author Boeri, Carlo
Chiappa, Corrado
Galli, Federica
De Berardinis, Valentina
Bardelli, Laura
Carcano, Giulio
Rovera, Francesca
author_facet Boeri, Carlo
Chiappa, Corrado
Galli, Federica
De Berardinis, Valentina
Bardelli, Laura
Carcano, Giulio
Rovera, Francesca
author_sort Boeri, Carlo
collection PubMed
description More than 750 000 women in Italy are surviving a diagnosis of breast cancer. A large body of literature tells us which characteristics impact the most on their prognosis. However, the prediction of each disease course and then the establishment of a therapeutic plan and follow‐up tailored to the patient is still very complicated. In order to address this issue, a multidisciplinary approach has become widely accepted, while the Multigene Signature Panels and the Nottingham Prognostic Index are still discussed options. The current technological resources permit to gather many data for each patient. Machine Learning (ML) allows us to draw on these data, to discover their mutual relations and to esteem the prognosis for the new instances. This study provides a primary evaluation of the application of ML to predict breast cancer prognosis. We analyzed 1021 patients who underwent surgery for breast cancer in our Institute and we included 610 of them. Three outcomes were chosen: cancer recurrence (both loco‐regional and systemic) and death from the disease within 32 months. We developed two types of ML models for every outcome (Artificial Neural Network and Support Vector Machine). Each ML algorithm was tested in accuracy (=95.29%‐96.86%), sensitivity (=0.35‐0.64), specificity (=0.97‐0.99), and AUC (=0.804‐0.916). These models might become an additional resource to evaluate the prognosis of breast cancer patients in our daily clinical practice. Before that, we should increase their sensitivity, according to literature, by considering a wider population sample with a longer period of follow‐up. However, specificity, accuracy, minimal additional costs, and reproducibility are already encouraging.
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spelling pubmed-71960422020-05-04 Machine Learning techniques in breast cancer prognosis prediction: A primary evaluation Boeri, Carlo Chiappa, Corrado Galli, Federica De Berardinis, Valentina Bardelli, Laura Carcano, Giulio Rovera, Francesca Cancer Med Cancer Prevention More than 750 000 women in Italy are surviving a diagnosis of breast cancer. A large body of literature tells us which characteristics impact the most on their prognosis. However, the prediction of each disease course and then the establishment of a therapeutic plan and follow‐up tailored to the patient is still very complicated. In order to address this issue, a multidisciplinary approach has become widely accepted, while the Multigene Signature Panels and the Nottingham Prognostic Index are still discussed options. The current technological resources permit to gather many data for each patient. Machine Learning (ML) allows us to draw on these data, to discover their mutual relations and to esteem the prognosis for the new instances. This study provides a primary evaluation of the application of ML to predict breast cancer prognosis. We analyzed 1021 patients who underwent surgery for breast cancer in our Institute and we included 610 of them. Three outcomes were chosen: cancer recurrence (both loco‐regional and systemic) and death from the disease within 32 months. We developed two types of ML models for every outcome (Artificial Neural Network and Support Vector Machine). Each ML algorithm was tested in accuracy (=95.29%‐96.86%), sensitivity (=0.35‐0.64), specificity (=0.97‐0.99), and AUC (=0.804‐0.916). These models might become an additional resource to evaluate the prognosis of breast cancer patients in our daily clinical practice. Before that, we should increase their sensitivity, according to literature, by considering a wider population sample with a longer period of follow‐up. However, specificity, accuracy, minimal additional costs, and reproducibility are already encouraging. John Wiley and Sons Inc. 2020-03-10 /pmc/articles/PMC7196042/ /pubmed/32154669 http://dx.doi.org/10.1002/cam4.2811 Text en © 2020 The Authors. Cancer Medicine published by John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Cancer Prevention
Boeri, Carlo
Chiappa, Corrado
Galli, Federica
De Berardinis, Valentina
Bardelli, Laura
Carcano, Giulio
Rovera, Francesca
Machine Learning techniques in breast cancer prognosis prediction: A primary evaluation
title Machine Learning techniques in breast cancer prognosis prediction: A primary evaluation
title_full Machine Learning techniques in breast cancer prognosis prediction: A primary evaluation
title_fullStr Machine Learning techniques in breast cancer prognosis prediction: A primary evaluation
title_full_unstemmed Machine Learning techniques in breast cancer prognosis prediction: A primary evaluation
title_short Machine Learning techniques in breast cancer prognosis prediction: A primary evaluation
title_sort machine learning techniques in breast cancer prognosis prediction: a primary evaluation
topic Cancer Prevention
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7196042/
https://www.ncbi.nlm.nih.gov/pubmed/32154669
http://dx.doi.org/10.1002/cam4.2811
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