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Genomic landscape of platinum resistant and sensitive testicular cancers

While most testicular germ cell tumours (TGCTs) exhibit exquisite sensitivity to platinum chemotherapy, ~10% are platinum resistant. To gain insight into the underlying mechanisms, we undertake whole exome sequencing and copy number analysis in 40 tumours from 26 cases with platinum-resistant TGCT,...

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Autores principales: Loveday, Chey, Litchfield, Kevin, Proszek, Paula Z., Cornish, Alex J., Santo, Flavia, Levy, Max, Macintyre, Geoff, Holryod, Amy, Broderick, Peter, Dudakia, Darshna, Benton, Barbara, Bakir, Maise Al, Hiley, Crispin, Grist, Emily, Swanton, Charles, Huddart, Robert, Powles, Tom, Chowdhury, Simon, Shipley, Janet, O’Connor, Simon, Brenton, James D., Reid, Alison, de Castro, David Gonzalez, Houlston, Richard S., Turnbull, Clare
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7198558/
https://www.ncbi.nlm.nih.gov/pubmed/32366847
http://dx.doi.org/10.1038/s41467-020-15768-x
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author Loveday, Chey
Litchfield, Kevin
Proszek, Paula Z.
Cornish, Alex J.
Santo, Flavia
Levy, Max
Macintyre, Geoff
Holryod, Amy
Broderick, Peter
Dudakia, Darshna
Benton, Barbara
Bakir, Maise Al
Hiley, Crispin
Grist, Emily
Swanton, Charles
Huddart, Robert
Powles, Tom
Chowdhury, Simon
Shipley, Janet
O’Connor, Simon
Brenton, James D.
Reid, Alison
de Castro, David Gonzalez
Houlston, Richard S.
Turnbull, Clare
author_facet Loveday, Chey
Litchfield, Kevin
Proszek, Paula Z.
Cornish, Alex J.
Santo, Flavia
Levy, Max
Macintyre, Geoff
Holryod, Amy
Broderick, Peter
Dudakia, Darshna
Benton, Barbara
Bakir, Maise Al
Hiley, Crispin
Grist, Emily
Swanton, Charles
Huddart, Robert
Powles, Tom
Chowdhury, Simon
Shipley, Janet
O’Connor, Simon
Brenton, James D.
Reid, Alison
de Castro, David Gonzalez
Houlston, Richard S.
Turnbull, Clare
author_sort Loveday, Chey
collection PubMed
description While most testicular germ cell tumours (TGCTs) exhibit exquisite sensitivity to platinum chemotherapy, ~10% are platinum resistant. To gain insight into the underlying mechanisms, we undertake whole exome sequencing and copy number analysis in 40 tumours from 26 cases with platinum-resistant TGCT, and combine this with published genomic data on an additional 624 TGCTs. We integrate analyses for driver mutations, mutational burden, global, arm-level and focal copy number (CN) events, and SNV and CN signatures. Albeit preliminary and observational in nature, these analyses provide support for a possible mechanistic link between early driver mutations in RAS and KIT and the widespread copy number events by which TGCT is characterised.
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spelling pubmed-71985582020-05-06 Genomic landscape of platinum resistant and sensitive testicular cancers Loveday, Chey Litchfield, Kevin Proszek, Paula Z. Cornish, Alex J. Santo, Flavia Levy, Max Macintyre, Geoff Holryod, Amy Broderick, Peter Dudakia, Darshna Benton, Barbara Bakir, Maise Al Hiley, Crispin Grist, Emily Swanton, Charles Huddart, Robert Powles, Tom Chowdhury, Simon Shipley, Janet O’Connor, Simon Brenton, James D. Reid, Alison de Castro, David Gonzalez Houlston, Richard S. Turnbull, Clare Nat Commun Article While most testicular germ cell tumours (TGCTs) exhibit exquisite sensitivity to platinum chemotherapy, ~10% are platinum resistant. To gain insight into the underlying mechanisms, we undertake whole exome sequencing and copy number analysis in 40 tumours from 26 cases with platinum-resistant TGCT, and combine this with published genomic data on an additional 624 TGCTs. We integrate analyses for driver mutations, mutational burden, global, arm-level and focal copy number (CN) events, and SNV and CN signatures. Albeit preliminary and observational in nature, these analyses provide support for a possible mechanistic link between early driver mutations in RAS and KIT and the widespread copy number events by which TGCT is characterised. Nature Publishing Group UK 2020-05-04 /pmc/articles/PMC7198558/ /pubmed/32366847 http://dx.doi.org/10.1038/s41467-020-15768-x Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Loveday, Chey
Litchfield, Kevin
Proszek, Paula Z.
Cornish, Alex J.
Santo, Flavia
Levy, Max
Macintyre, Geoff
Holryod, Amy
Broderick, Peter
Dudakia, Darshna
Benton, Barbara
Bakir, Maise Al
Hiley, Crispin
Grist, Emily
Swanton, Charles
Huddart, Robert
Powles, Tom
Chowdhury, Simon
Shipley, Janet
O’Connor, Simon
Brenton, James D.
Reid, Alison
de Castro, David Gonzalez
Houlston, Richard S.
Turnbull, Clare
Genomic landscape of platinum resistant and sensitive testicular cancers
title Genomic landscape of platinum resistant and sensitive testicular cancers
title_full Genomic landscape of platinum resistant and sensitive testicular cancers
title_fullStr Genomic landscape of platinum resistant and sensitive testicular cancers
title_full_unstemmed Genomic landscape of platinum resistant and sensitive testicular cancers
title_short Genomic landscape of platinum resistant and sensitive testicular cancers
title_sort genomic landscape of platinum resistant and sensitive testicular cancers
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7198558/
https://www.ncbi.nlm.nih.gov/pubmed/32366847
http://dx.doi.org/10.1038/s41467-020-15768-x
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