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Time Window Determination for Inference of Time-Varying Dynamics: Application to Cardiorespiratory Interaction
Interacting dynamical systems abound in nature, with examples ranging from biology and population dynamics, through physics and chemistry, to communications and climate. Often their states, parameters and functions are time-varying, because such systems interact with other systems and the environmen...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7198895/ https://www.ncbi.nlm.nih.gov/pubmed/32411009 http://dx.doi.org/10.3389/fphys.2020.00341 |
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author | Lukarski, Dushko Ginovska, Margarita Spasevska, Hristina Stankovski, Tomislav |
author_facet | Lukarski, Dushko Ginovska, Margarita Spasevska, Hristina Stankovski, Tomislav |
author_sort | Lukarski, Dushko |
collection | PubMed |
description | Interacting dynamical systems abound in nature, with examples ranging from biology and population dynamics, through physics and chemistry, to communications and climate. Often their states, parameters and functions are time-varying, because such systems interact with other systems and the environment, exchanging information and matter. A common problem when analysing time-series data from dynamical systems is how to determine the length of the time window for the analysis. When one needs to follow the time-variability of the dynamics, or the dynamical parameters and functions, the time window needs to be resolved first. We tackled this problem by introducing a method for adaptive determination of the time window for interacting oscillators, as modeled and scaled for the cardiorespiratory interaction. By investigating a system of coupled phase oscillators and utilizing the Dynamical Bayesian Inference method, we propose a procedure to determine the time window and the propagation parameter of the covariance matrix. The optimal values are determined so that the inferred parameters follow the dynamics of the actual ones and at the same time the error of the inference represented by the covariance matrix is minimal. The effectiveness of the methodology is presented on a system of coupled limit-cycle oscillators and on the cardiorespiratory interaction. Three cases of cardiorespiratory interaction were considered—measurement with spontaneous free breathing, one with periodic sine breathing and one with a-periodic time-varying breathing. The results showed that the cardiorespiratory coupling strength and similarity of form of coupling functions have greater values for slower breathing, and this variability follows continuously the change of the breathing frequency. The method can be applied effectively to other time-varying oscillatory interactions and carries important implications for analysis of general dynamical systems. |
format | Online Article Text |
id | pubmed-7198895 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-71988952020-05-14 Time Window Determination for Inference of Time-Varying Dynamics: Application to Cardiorespiratory Interaction Lukarski, Dushko Ginovska, Margarita Spasevska, Hristina Stankovski, Tomislav Front Physiol Physiology Interacting dynamical systems abound in nature, with examples ranging from biology and population dynamics, through physics and chemistry, to communications and climate. Often their states, parameters and functions are time-varying, because such systems interact with other systems and the environment, exchanging information and matter. A common problem when analysing time-series data from dynamical systems is how to determine the length of the time window for the analysis. When one needs to follow the time-variability of the dynamics, or the dynamical parameters and functions, the time window needs to be resolved first. We tackled this problem by introducing a method for adaptive determination of the time window for interacting oscillators, as modeled and scaled for the cardiorespiratory interaction. By investigating a system of coupled phase oscillators and utilizing the Dynamical Bayesian Inference method, we propose a procedure to determine the time window and the propagation parameter of the covariance matrix. The optimal values are determined so that the inferred parameters follow the dynamics of the actual ones and at the same time the error of the inference represented by the covariance matrix is minimal. The effectiveness of the methodology is presented on a system of coupled limit-cycle oscillators and on the cardiorespiratory interaction. Three cases of cardiorespiratory interaction were considered—measurement with spontaneous free breathing, one with periodic sine breathing and one with a-periodic time-varying breathing. The results showed that the cardiorespiratory coupling strength and similarity of form of coupling functions have greater values for slower breathing, and this variability follows continuously the change of the breathing frequency. The method can be applied effectively to other time-varying oscillatory interactions and carries important implications for analysis of general dynamical systems. Frontiers Media S.A. 2020-04-28 /pmc/articles/PMC7198895/ /pubmed/32411009 http://dx.doi.org/10.3389/fphys.2020.00341 Text en Copyright © 2020 Lukarski, Ginovska, Spasevska and Stankovski. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Physiology Lukarski, Dushko Ginovska, Margarita Spasevska, Hristina Stankovski, Tomislav Time Window Determination for Inference of Time-Varying Dynamics: Application to Cardiorespiratory Interaction |
title | Time Window Determination for Inference of Time-Varying Dynamics: Application to Cardiorespiratory Interaction |
title_full | Time Window Determination for Inference of Time-Varying Dynamics: Application to Cardiorespiratory Interaction |
title_fullStr | Time Window Determination for Inference of Time-Varying Dynamics: Application to Cardiorespiratory Interaction |
title_full_unstemmed | Time Window Determination for Inference of Time-Varying Dynamics: Application to Cardiorespiratory Interaction |
title_short | Time Window Determination for Inference of Time-Varying Dynamics: Application to Cardiorespiratory Interaction |
title_sort | time window determination for inference of time-varying dynamics: application to cardiorespiratory interaction |
topic | Physiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7198895/ https://www.ncbi.nlm.nih.gov/pubmed/32411009 http://dx.doi.org/10.3389/fphys.2020.00341 |
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