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Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 2-(2,3-di­hydro-1H-perimidin-2-yl)-6-meth­oxy­phenol

The title compound, C(18)H(16)N(2)O(2), consists of perimidine and meth­oxy­phenol units, where the tricyclic perimidine unit contains a naphthalene ring system and a non-planar C(4)N(2) ring adopting an envelope conformation with the NCN group hinged by 47.44 (7)° with respect to the best plane of...

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Autores principales: Daouda, Ballo, Tuo, Nanou Tiéba, Hökelek, Tuncer, Niameke Jean-Baptiste, Kangah, Charles Guillaume, Kodjo, Claude, Kablan Ahmont Landry, Essassi, El Mokhtar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7199263/
https://www.ncbi.nlm.nih.gov/pubmed/32431917
http://dx.doi.org/10.1107/S2056989020004284
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author Daouda, Ballo
Tuo, Nanou Tiéba
Hökelek, Tuncer
Niameke Jean-Baptiste, Kangah
Charles Guillaume, Kodjo
Claude, Kablan Ahmont Landry
Essassi, El Mokhtar
author_facet Daouda, Ballo
Tuo, Nanou Tiéba
Hökelek, Tuncer
Niameke Jean-Baptiste, Kangah
Charles Guillaume, Kodjo
Claude, Kablan Ahmont Landry
Essassi, El Mokhtar
author_sort Daouda, Ballo
collection PubMed
description The title compound, C(18)H(16)N(2)O(2), consists of perimidine and meth­oxy­phenol units, where the tricyclic perimidine unit contains a naphthalene ring system and a non-planar C(4)N(2) ring adopting an envelope conformation with the NCN group hinged by 47.44 (7)° with respect to the best plane of the other five atoms. In the crystal, O—H(Phnl)⋯N(Prmdn) and N—H(Prmdn)⋯O(Phnl) (Phnl = phenol and Prmdn = perimidine) hydrogen bonds link the mol­ecules into infinite chains along the b-axis direction. Weak C—H⋯π inter­actions may further stabilize the crystal structure. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions for the crystal packing are from H⋯H (49.0%), H⋯C/C⋯H (35.8%) and H⋯O/O⋯H (12.0%) inter­actions. Hydrogen bonding and van der Waals inter­actions are the dominant inter­actions in the crystal packing. Computational chemistry indicates that in the crystal, the O—H(Phnl)⋯N(Prmdn) and N—H(Prmdn)⋯O(Phnl) hydrogen-bond energies are 58.4 and 38.0 kJ mol(−1), respectively. Density functional theory (DFT) optimized structures at the B3LYP/ 6–311 G(d,p) level are compared with the experimentally determined mol­ecular structure in the solid state. The HOMO–LUMO behaviour was elucidated to determine the energy gap.
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spelling pubmed-71992632020-05-19 Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 2-(2,3-di­hydro-1H-perimidin-2-yl)-6-meth­oxy­phenol Daouda, Ballo Tuo, Nanou Tiéba Hökelek, Tuncer Niameke Jean-Baptiste, Kangah Charles Guillaume, Kodjo Claude, Kablan Ahmont Landry Essassi, El Mokhtar Acta Crystallogr E Crystallogr Commun Research Communications The title compound, C(18)H(16)N(2)O(2), consists of perimidine and meth­oxy­phenol units, where the tricyclic perimidine unit contains a naphthalene ring system and a non-planar C(4)N(2) ring adopting an envelope conformation with the NCN group hinged by 47.44 (7)° with respect to the best plane of the other five atoms. In the crystal, O—H(Phnl)⋯N(Prmdn) and N—H(Prmdn)⋯O(Phnl) (Phnl = phenol and Prmdn = perimidine) hydrogen bonds link the mol­ecules into infinite chains along the b-axis direction. Weak C—H⋯π inter­actions may further stabilize the crystal structure. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions for the crystal packing are from H⋯H (49.0%), H⋯C/C⋯H (35.8%) and H⋯O/O⋯H (12.0%) inter­actions. Hydrogen bonding and van der Waals inter­actions are the dominant inter­actions in the crystal packing. Computational chemistry indicates that in the crystal, the O—H(Phnl)⋯N(Prmdn) and N—H(Prmdn)⋯O(Phnl) hydrogen-bond energies are 58.4 and 38.0 kJ mol(−1), respectively. Density functional theory (DFT) optimized structures at the B3LYP/ 6–311 G(d,p) level are compared with the experimentally determined mol­ecular structure in the solid state. The HOMO–LUMO behaviour was elucidated to determine the energy gap. International Union of Crystallography 2020-04-03 /pmc/articles/PMC7199263/ /pubmed/32431917 http://dx.doi.org/10.1107/S2056989020004284 Text en © Daouda et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Daouda, Ballo
Tuo, Nanou Tiéba
Hökelek, Tuncer
Niameke Jean-Baptiste, Kangah
Charles Guillaume, Kodjo
Claude, Kablan Ahmont Landry
Essassi, El Mokhtar
Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 2-(2,3-di­hydro-1H-perimidin-2-yl)-6-meth­oxy­phenol
title Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 2-(2,3-di­hydro-1H-perimidin-2-yl)-6-meth­oxy­phenol
title_full Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 2-(2,3-di­hydro-1H-perimidin-2-yl)-6-meth­oxy­phenol
title_fullStr Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 2-(2,3-di­hydro-1H-perimidin-2-yl)-6-meth­oxy­phenol
title_full_unstemmed Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 2-(2,3-di­hydro-1H-perimidin-2-yl)-6-meth­oxy­phenol
title_short Crystal structure, Hirshfeld surface analysis and inter­action energy and DFT studies of 2-(2,3-di­hydro-1H-perimidin-2-yl)-6-meth­oxy­phenol
title_sort crystal structure, hirshfeld surface analysis and inter­action energy and dft studies of 2-(2,3-di­hydro-1h-perimidin-2-yl)-6-meth­oxy­phenol
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7199263/
https://www.ncbi.nlm.nih.gov/pubmed/32431917
http://dx.doi.org/10.1107/S2056989020004284
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