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Crystal structure, Hirshfeld surface analysis and DFT studies of 6-bromo-3-(12-bromo­dodec­yl)-2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine

The title compound, C(24)H(30)Br(2)N(4)O(2), consists of a 2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine entity with a 12-bromo­dodecyl substituent attached to the pyridine N atom. The middle eight-carbon portion of the side chain is planar to within 0.09 (1) Å and makes a dihedral angle of 21.9 (8)...

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Autores principales: Jabri, Zainab, Jarmoni, Karim, Hökelek, Tuncer, Mague, Joel T., Sabir, Safia, Kandri Rodi, Youssef, Misbahi, Khalid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7199264/
https://www.ncbi.nlm.nih.gov/pubmed/32431932
http://dx.doi.org/10.1107/S2056989020005228
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author Jabri, Zainab
Jarmoni, Karim
Hökelek, Tuncer
Mague, Joel T.
Sabir, Safia
Kandri Rodi, Youssef
Misbahi, Khalid
author_facet Jabri, Zainab
Jarmoni, Karim
Hökelek, Tuncer
Mague, Joel T.
Sabir, Safia
Kandri Rodi, Youssef
Misbahi, Khalid
author_sort Jabri, Zainab
collection PubMed
description The title compound, C(24)H(30)Br(2)N(4)O(2), consists of a 2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine entity with a 12-bromo­dodecyl substituent attached to the pyridine N atom. The middle eight-carbon portion of the side chain is planar to within 0.09 (1) Å and makes a dihedral angle of 21.9 (8)° with the mean plane of the imidazolo­pyridine moiety, giving the mol­ecule a V-shape. In the crystal, the imidazolo­pyridine units are associated through slipped π–π stacking inter­actions together with weak C—H(Pyr)⋯O(Ntr) and C—H(Brmdc­yl)⋯O(Ntr) (Pyr = pyridine, Ntr = nitro and Brmdcyl = bromo­dodec­yl) hydrogen bonds. The 12-bromo­dodecyl chains overlap with each other between the stacks. The terminal –CH(2)Br group of the side chain shows disorder over two resolved sites in a 0.902 (3):0.098 (3) ratio. Hirshfeld surface analysis indicates that the most important contributions for the crystal packing are from H⋯H (48.1%), H⋯Br/Br⋯H (15.0%) and H⋯O/O⋯H (12.8%) inter­actions. The optimized mol­ecular structure, using density functional theory at the B3LYP/ 6–311 G(d,p) level, is compared with the experimentally determined structure in the solid state. The HOMO–LUMO behaviour was elucidated to determine the energy gap.
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spelling pubmed-71992642020-05-19 Crystal structure, Hirshfeld surface analysis and DFT studies of 6-bromo-3-(12-bromo­dodec­yl)-2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine Jabri, Zainab Jarmoni, Karim Hökelek, Tuncer Mague, Joel T. Sabir, Safia Kandri Rodi, Youssef Misbahi, Khalid Acta Crystallogr E Crystallogr Commun Research Communications The title compound, C(24)H(30)Br(2)N(4)O(2), consists of a 2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine entity with a 12-bromo­dodecyl substituent attached to the pyridine N atom. The middle eight-carbon portion of the side chain is planar to within 0.09 (1) Å and makes a dihedral angle of 21.9 (8)° with the mean plane of the imidazolo­pyridine moiety, giving the mol­ecule a V-shape. In the crystal, the imidazolo­pyridine units are associated through slipped π–π stacking inter­actions together with weak C—H(Pyr)⋯O(Ntr) and C—H(Brmdc­yl)⋯O(Ntr) (Pyr = pyridine, Ntr = nitro and Brmdcyl = bromo­dodec­yl) hydrogen bonds. The 12-bromo­dodecyl chains overlap with each other between the stacks. The terminal –CH(2)Br group of the side chain shows disorder over two resolved sites in a 0.902 (3):0.098 (3) ratio. Hirshfeld surface analysis indicates that the most important contributions for the crystal packing are from H⋯H (48.1%), H⋯Br/Br⋯H (15.0%) and H⋯O/O⋯H (12.8%) inter­actions. The optimized mol­ecular structure, using density functional theory at the B3LYP/ 6–311 G(d,p) level, is compared with the experimentally determined structure in the solid state. The HOMO–LUMO behaviour was elucidated to determine the energy gap. International Union of Crystallography 2020-04-21 /pmc/articles/PMC7199264/ /pubmed/32431932 http://dx.doi.org/10.1107/S2056989020005228 Text en © Jabri et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Jabri, Zainab
Jarmoni, Karim
Hökelek, Tuncer
Mague, Joel T.
Sabir, Safia
Kandri Rodi, Youssef
Misbahi, Khalid
Crystal structure, Hirshfeld surface analysis and DFT studies of 6-bromo-3-(12-bromo­dodec­yl)-2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine
title Crystal structure, Hirshfeld surface analysis and DFT studies of 6-bromo-3-(12-bromo­dodec­yl)-2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine
title_full Crystal structure, Hirshfeld surface analysis and DFT studies of 6-bromo-3-(12-bromo­dodec­yl)-2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine
title_fullStr Crystal structure, Hirshfeld surface analysis and DFT studies of 6-bromo-3-(12-bromo­dodec­yl)-2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine
title_full_unstemmed Crystal structure, Hirshfeld surface analysis and DFT studies of 6-bromo-3-(12-bromo­dodec­yl)-2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine
title_short Crystal structure, Hirshfeld surface analysis and DFT studies of 6-bromo-3-(12-bromo­dodec­yl)-2-(4-nitro­phen­yl)-4H-imidazo[4,5-b]pyridine
title_sort crystal structure, hirshfeld surface analysis and dft studies of 6-bromo-3-(12-bromo­dodec­yl)-2-(4-nitro­phen­yl)-4h-imidazo[4,5-b]pyridine
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7199264/
https://www.ncbi.nlm.nih.gov/pubmed/32431932
http://dx.doi.org/10.1107/S2056989020005228
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