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Expression and interactions of stereochemically active lone pairs and their relation to structural distortions and thermal conductivity
In chemistry, stereochemically active lone pairs are typically described as an important non-bonding effect, and recent interest has centred on understanding the derived effect of lone pair expression on physical properties such as thermal conductivity. To manipulate such properties, it is essential...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7201275/ https://www.ncbi.nlm.nih.gov/pubmed/32431831 http://dx.doi.org/10.1107/S2052252520003619 |
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author | Tolborg, Kasper Gatti, Carlo Iversen, Bo B. |
author_facet | Tolborg, Kasper Gatti, Carlo Iversen, Bo B. |
author_sort | Tolborg, Kasper |
collection | PubMed |
description | In chemistry, stereochemically active lone pairs are typically described as an important non-bonding effect, and recent interest has centred on understanding the derived effect of lone pair expression on physical properties such as thermal conductivity. To manipulate such properties, it is essential to understand the conditions that lead to lone pair expression and provide a quantitative chemical description of their identity to allow comparison between systems. Here, density functional theory calculations are used first to establish the presence of stereochemically active lone pairs on antimony in the archetypical chalcogenide MnSb(2)O(4). The lone pairs are formed through a similar mechanism to those in binary post-transition metal compounds in an oxidation state of two less than their main group number [e.g. Pb(II) and Sb(III)], where the degree of orbital interaction (covalency) determines the expression of the lone pair. In MnSb(2)O(4) the Sb lone pairs interact through a void space in the crystal structure, and their their mutual repulsion is minimized by introducing a deflection angle. This angle increases significantly with decreasing Sb—Sb distance introduced by simulating high pressure, thus showing the highly destabilizing nature of the lone pair interactions. Analysis of the chemical bonding in MnSb(2)O(4) shows that it is dominated by polar covalent interactions with significant contributions both from charge accumulation in the bonding regions and from charge transfer. A database search of related ternary chalcogenide structures shows that, for structures with a lone pair (SbX (3) units), the degree of lone pair expression is largely determined by whether the antimony–chalcogen units are connected or not, suggesting a cooperative effect. Isolated SbX (3) units have larger X—Sb—X bond angles and therefore weaker lone pair expression than connected units. Since increased lone pair expression is equivalent to an increased orbital interaction (covalent bonding), which typically leads to increased heat conduction, this can explain the previously established correlation between larger bond angles and lower thermal conductivity. Thus, it appears that for these chalcogenides, lone pair expression and thermal conductivity may be related through the degree of covalency of the system. |
format | Online Article Text |
id | pubmed-7201275 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-72012752020-05-19 Expression and interactions of stereochemically active lone pairs and their relation to structural distortions and thermal conductivity Tolborg, Kasper Gatti, Carlo Iversen, Bo B. IUCrJ Research Papers In chemistry, stereochemically active lone pairs are typically described as an important non-bonding effect, and recent interest has centred on understanding the derived effect of lone pair expression on physical properties such as thermal conductivity. To manipulate such properties, it is essential to understand the conditions that lead to lone pair expression and provide a quantitative chemical description of their identity to allow comparison between systems. Here, density functional theory calculations are used first to establish the presence of stereochemically active lone pairs on antimony in the archetypical chalcogenide MnSb(2)O(4). The lone pairs are formed through a similar mechanism to those in binary post-transition metal compounds in an oxidation state of two less than their main group number [e.g. Pb(II) and Sb(III)], where the degree of orbital interaction (covalency) determines the expression of the lone pair. In MnSb(2)O(4) the Sb lone pairs interact through a void space in the crystal structure, and their their mutual repulsion is minimized by introducing a deflection angle. This angle increases significantly with decreasing Sb—Sb distance introduced by simulating high pressure, thus showing the highly destabilizing nature of the lone pair interactions. Analysis of the chemical bonding in MnSb(2)O(4) shows that it is dominated by polar covalent interactions with significant contributions both from charge accumulation in the bonding regions and from charge transfer. A database search of related ternary chalcogenide structures shows that, for structures with a lone pair (SbX (3) units), the degree of lone pair expression is largely determined by whether the antimony–chalcogen units are connected or not, suggesting a cooperative effect. Isolated SbX (3) units have larger X—Sb—X bond angles and therefore weaker lone pair expression than connected units. Since increased lone pair expression is equivalent to an increased orbital interaction (covalent bonding), which typically leads to increased heat conduction, this can explain the previously established correlation between larger bond angles and lower thermal conductivity. Thus, it appears that for these chalcogenides, lone pair expression and thermal conductivity may be related through the degree of covalency of the system. International Union of Crystallography 2020-03-31 /pmc/articles/PMC7201275/ /pubmed/32431831 http://dx.doi.org/10.1107/S2052252520003619 Text en © Tolborg et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Papers Tolborg, Kasper Gatti, Carlo Iversen, Bo B. Expression and interactions of stereochemically active lone pairs and their relation to structural distortions and thermal conductivity |
title | Expression and interactions of stereochemically active lone pairs and their relation to structural distortions and thermal conductivity |
title_full | Expression and interactions of stereochemically active lone pairs and their relation to structural distortions and thermal conductivity |
title_fullStr | Expression and interactions of stereochemically active lone pairs and their relation to structural distortions and thermal conductivity |
title_full_unstemmed | Expression and interactions of stereochemically active lone pairs and their relation to structural distortions and thermal conductivity |
title_short | Expression and interactions of stereochemically active lone pairs and their relation to structural distortions and thermal conductivity |
title_sort | expression and interactions of stereochemically active lone pairs and their relation to structural distortions and thermal conductivity |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7201275/ https://www.ncbi.nlm.nih.gov/pubmed/32431831 http://dx.doi.org/10.1107/S2052252520003619 |
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