Cargando…
Detection of Tuberculosis by The Analysis of Exhaled Breath Particles with High-resolution Mass Spectrometry
Tuberculosis remains a global health threat killing over 1 million people per year. Current sputum-based diagnostics are specific but lack sensitivity resulting in treatment of many sputum negative cases. In this proof-of-concept study, we used high-resolution mass spectrometry to identify specific...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7203136/ https://www.ncbi.nlm.nih.gov/pubmed/32376992 http://dx.doi.org/10.1038/s41598-020-64637-6 |
_version_ | 1783529819343945728 |
---|---|
author | Chen, Dapeng Bryden, Wayne A. Wood, Robin |
author_facet | Chen, Dapeng Bryden, Wayne A. Wood, Robin |
author_sort | Chen, Dapeng |
collection | PubMed |
description | Tuberculosis remains a global health threat killing over 1 million people per year. Current sputum-based diagnostics are specific but lack sensitivity resulting in treatment of many sputum negative cases. In this proof-of-concept study, we used high-resolution mass spectrometry to identify specific lipids in peripheral lung fluid samples of TB patients and controls, captured using a novel non-invasive sampling system. Exhaled respiratory particles were collected in liquid and after concentration and lipid extraction directly infused into a high-resolution mass spectrometer. High-resolution mass spectrometric data collection was conducted in a dual ion mode and chemical compositions were constructed using accurate mass measurement. Over 400 features with high segregating capacity were extracted and optimized using feature selection algorithm and machine learning, from which the accuracy of detection of positive tuberculosis patients was estimated. This current strategy provides sensitivity offered by high-resolution mass spectrometry and can be readily susceptible for developing a novel clinical assay exploring peripheral lung fluid for the detection of active TB cases. |
format | Online Article Text |
id | pubmed-7203136 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-72031362020-05-12 Detection of Tuberculosis by The Analysis of Exhaled Breath Particles with High-resolution Mass Spectrometry Chen, Dapeng Bryden, Wayne A. Wood, Robin Sci Rep Article Tuberculosis remains a global health threat killing over 1 million people per year. Current sputum-based diagnostics are specific but lack sensitivity resulting in treatment of many sputum negative cases. In this proof-of-concept study, we used high-resolution mass spectrometry to identify specific lipids in peripheral lung fluid samples of TB patients and controls, captured using a novel non-invasive sampling system. Exhaled respiratory particles were collected in liquid and after concentration and lipid extraction directly infused into a high-resolution mass spectrometer. High-resolution mass spectrometric data collection was conducted in a dual ion mode and chemical compositions were constructed using accurate mass measurement. Over 400 features with high segregating capacity were extracted and optimized using feature selection algorithm and machine learning, from which the accuracy of detection of positive tuberculosis patients was estimated. This current strategy provides sensitivity offered by high-resolution mass spectrometry and can be readily susceptible for developing a novel clinical assay exploring peripheral lung fluid for the detection of active TB cases. Nature Publishing Group UK 2020-05-06 /pmc/articles/PMC7203136/ /pubmed/32376992 http://dx.doi.org/10.1038/s41598-020-64637-6 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Chen, Dapeng Bryden, Wayne A. Wood, Robin Detection of Tuberculosis by The Analysis of Exhaled Breath Particles with High-resolution Mass Spectrometry |
title | Detection of Tuberculosis by The Analysis of Exhaled Breath Particles with High-resolution Mass Spectrometry |
title_full | Detection of Tuberculosis by The Analysis of Exhaled Breath Particles with High-resolution Mass Spectrometry |
title_fullStr | Detection of Tuberculosis by The Analysis of Exhaled Breath Particles with High-resolution Mass Spectrometry |
title_full_unstemmed | Detection of Tuberculosis by The Analysis of Exhaled Breath Particles with High-resolution Mass Spectrometry |
title_short | Detection of Tuberculosis by The Analysis of Exhaled Breath Particles with High-resolution Mass Spectrometry |
title_sort | detection of tuberculosis by the analysis of exhaled breath particles with high-resolution mass spectrometry |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7203136/ https://www.ncbi.nlm.nih.gov/pubmed/32376992 http://dx.doi.org/10.1038/s41598-020-64637-6 |
work_keys_str_mv | AT chendapeng detectionoftuberculosisbytheanalysisofexhaledbreathparticleswithhighresolutionmassspectrometry AT brydenwaynea detectionoftuberculosisbytheanalysisofexhaledbreathparticleswithhighresolutionmassspectrometry AT woodrobin detectionoftuberculosisbytheanalysisofexhaledbreathparticleswithhighresolutionmassspectrometry |