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SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology: The first step towards interdisciplinary standardized data collection for personalized oncology in skin cancer
PURPOSE: The primary objective of the SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology is to define a specific terminological system to standardize data collection for non-melanoma skin cancer patients treated with brachytherapy (BT, interventional radiotherapy). Through ontological...
Autores principales: | , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Termedia Publishing House
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7207239/ https://www.ncbi.nlm.nih.gov/pubmed/32395133 http://dx.doi.org/10.5114/jcb.2020.94579 |
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author | Lancellotta, Valentina Guinot, Josè Luis Fionda, Bruno Rembielak, Agata Di Stefani, Alessandro Gentileschi, Stefano Federico, Francesco Rossi, Ernesto Guix, Benjamin Chyrek, Artur Jan Meritxell, Arenas Villalba, Silvia Rodriguez Colloca, Giuseppe Ferdinando Dinapoli, Nicola Masciocchi, Carlotta Lenkowicz, Jacopo Capocchiano, Nicola Dino Damiani, Andrea Valentini, Vincenzo Kovács, Gyorgy Tagliaferri, Luca |
author_facet | Lancellotta, Valentina Guinot, Josè Luis Fionda, Bruno Rembielak, Agata Di Stefani, Alessandro Gentileschi, Stefano Federico, Francesco Rossi, Ernesto Guix, Benjamin Chyrek, Artur Jan Meritxell, Arenas Villalba, Silvia Rodriguez Colloca, Giuseppe Ferdinando Dinapoli, Nicola Masciocchi, Carlotta Lenkowicz, Jacopo Capocchiano, Nicola Dino Damiani, Andrea Valentini, Vincenzo Kovács, Gyorgy Tagliaferri, Luca |
author_sort | Lancellotta, Valentina |
collection | PubMed |
description | PURPOSE: The primary objective of the SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology is to define a specific terminological system to standardize data collection for non-melanoma skin cancer patients treated with brachytherapy (BT, interventional radiotherapy). Through ontological characterization of information, it is possible to find, isolate, organize, and integrate its meaning. MATERIAL AND METHODS: SKIN-COBRA is a standardized data collection consortium for non-melanoma skin patients treated with BT, including 8 cancer centers. Its ontology was firstly defined by a multicentric and multidisciplinary working group and evaluated by the consortium, followed by a multi-professional technical commission involving a mathematician, an engineer, a physician with experience in data storage, a programmer, and a software expert. RESULTS: Two hundred and ninety variables were defined in 10 input forms. There are 3 levels, with each offering a specific type of analysis: 1. Registry level (epidemiology analysis); 2. Procedures level (standard oncology analysis); 3. Research level (radiomics analysis). The ontology was approved by the technical commission and consortium, and an ad-hoc software system was defined to be implemented in the SKIN-COBRA consortium. CONCLUSIONS: Large databases are natural extension of traditional statistical approaches, a valuable and increasingly necessary tool for modern healthcare system. Future analysis of the collected multinational and multicenter data will show whether the use of the system can produce high-quality evidence to support multidisciplinary management of non-melanoma skin cancer and utilizing this information for personalized treatment decisions. |
format | Online Article Text |
id | pubmed-7207239 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Termedia Publishing House |
record_format | MEDLINE/PubMed |
spelling | pubmed-72072392020-05-11 SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology: The first step towards interdisciplinary standardized data collection for personalized oncology in skin cancer Lancellotta, Valentina Guinot, Josè Luis Fionda, Bruno Rembielak, Agata Di Stefani, Alessandro Gentileschi, Stefano Federico, Francesco Rossi, Ernesto Guix, Benjamin Chyrek, Artur Jan Meritxell, Arenas Villalba, Silvia Rodriguez Colloca, Giuseppe Ferdinando Dinapoli, Nicola Masciocchi, Carlotta Lenkowicz, Jacopo Capocchiano, Nicola Dino Damiani, Andrea Valentini, Vincenzo Kovács, Gyorgy Tagliaferri, Luca J Contemp Brachytherapy Original Paper PURPOSE: The primary objective of the SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology is to define a specific terminological system to standardize data collection for non-melanoma skin cancer patients treated with brachytherapy (BT, interventional radiotherapy). Through ontological characterization of information, it is possible to find, isolate, organize, and integrate its meaning. MATERIAL AND METHODS: SKIN-COBRA is a standardized data collection consortium for non-melanoma skin patients treated with BT, including 8 cancer centers. Its ontology was firstly defined by a multicentric and multidisciplinary working group and evaluated by the consortium, followed by a multi-professional technical commission involving a mathematician, an engineer, a physician with experience in data storage, a programmer, and a software expert. RESULTS: Two hundred and ninety variables were defined in 10 input forms. There are 3 levels, with each offering a specific type of analysis: 1. Registry level (epidemiology analysis); 2. Procedures level (standard oncology analysis); 3. Research level (radiomics analysis). The ontology was approved by the technical commission and consortium, and an ad-hoc software system was defined to be implemented in the SKIN-COBRA consortium. CONCLUSIONS: Large databases are natural extension of traditional statistical approaches, a valuable and increasingly necessary tool for modern healthcare system. Future analysis of the collected multinational and multicenter data will show whether the use of the system can produce high-quality evidence to support multidisciplinary management of non-melanoma skin cancer and utilizing this information for personalized treatment decisions. Termedia Publishing House 2020-04-30 2020-04 /pmc/articles/PMC7207239/ /pubmed/32395133 http://dx.doi.org/10.5114/jcb.2020.94579 Text en Copyright © 2020 Termedia http://creativecommons.org/licenses/by-nc-sa/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0). License (http://creativecommons.org/licenses/by-nc-sa/4.0/) |
spellingShingle | Original Paper Lancellotta, Valentina Guinot, Josè Luis Fionda, Bruno Rembielak, Agata Di Stefani, Alessandro Gentileschi, Stefano Federico, Francesco Rossi, Ernesto Guix, Benjamin Chyrek, Artur Jan Meritxell, Arenas Villalba, Silvia Rodriguez Colloca, Giuseppe Ferdinando Dinapoli, Nicola Masciocchi, Carlotta Lenkowicz, Jacopo Capocchiano, Nicola Dino Damiani, Andrea Valentini, Vincenzo Kovács, Gyorgy Tagliaferri, Luca SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology: The first step towards interdisciplinary standardized data collection for personalized oncology in skin cancer |
title | SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology: The first step towards interdisciplinary standardized data collection for personalized oncology in skin cancer |
title_full | SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology: The first step towards interdisciplinary standardized data collection for personalized oncology in skin cancer |
title_fullStr | SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology: The first step towards interdisciplinary standardized data collection for personalized oncology in skin cancer |
title_full_unstemmed | SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology: The first step towards interdisciplinary standardized data collection for personalized oncology in skin cancer |
title_short | SKIN-COBRA (Consortium for Brachytherapy data Analysis) ontology: The first step towards interdisciplinary standardized data collection for personalized oncology in skin cancer |
title_sort | skin-cobra (consortium for brachytherapy data analysis) ontology: the first step towards interdisciplinary standardized data collection for personalized oncology in skin cancer |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7207239/ https://www.ncbi.nlm.nih.gov/pubmed/32395133 http://dx.doi.org/10.5114/jcb.2020.94579 |
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