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Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale

Anthocyanins, a group of flavonoids, are widely present in plants and determine the colors of the peels of stems, fruits, and flowers. In this study, we used UHPLC-ESI-MS to identify anthocyanins in the herbal plant Dendrobium officinale, which has been used for centuries in China. The results indic...

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Detalles Bibliográficos
Autores principales: Ren, Zhiyao, Qiu, Fangning, Wang, Yinjie, Yu, Wenxia, Liu, Chenxing, Sun, Yangyang, Wang, Yawen, Zhang, Xiaofeng, Xing, Shangping, Tao, Shengchang, Huang, Yuechun, Liu, Guoxiong, Wei, Zhaofeng, Yu, Baiyin, Du, Shuxiu, Lei, Zhouxi, Wei, Gang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7210514/
https://www.ncbi.nlm.nih.gov/pubmed/32420359
http://dx.doi.org/10.1155/2020/6512895
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author Ren, Zhiyao
Qiu, Fangning
Wang, Yinjie
Yu, Wenxia
Liu, Chenxing
Sun, Yangyang
Wang, Yawen
Zhang, Xiaofeng
Xing, Shangping
Tao, Shengchang
Huang, Yuechun
Liu, Guoxiong
Wei, Zhaofeng
Yu, Baiyin
Du, Shuxiu
Lei, Zhouxi
Wei, Gang
author_facet Ren, Zhiyao
Qiu, Fangning
Wang, Yinjie
Yu, Wenxia
Liu, Chenxing
Sun, Yangyang
Wang, Yawen
Zhang, Xiaofeng
Xing, Shangping
Tao, Shengchang
Huang, Yuechun
Liu, Guoxiong
Wei, Zhaofeng
Yu, Baiyin
Du, Shuxiu
Lei, Zhouxi
Wei, Gang
author_sort Ren, Zhiyao
collection PubMed
description Anthocyanins, a group of flavonoids, are widely present in plants and determine the colors of the peels of stems, fruits, and flowers. In this study, we used UHPLC-ESI-MS to identify anthocyanins in the herbal plant Dendrobium officinale, which has been used for centuries in China. The results indicated that the total anthocyanin content in samples from Guangxi was the highest. Seven anthocyanins were identified, and the fragmentation pathways were proposed from D. officinale. Most of the identified anthocyanins were composed of cyanidin and sinapoyl groups. We also carried out that the sinapoyl group had active sites on breast cancer receptors by using Schrödinger. The relative levels of the 7 anthocyanins in the samples from the three locations were determined. Transcriptomic analysis was used to analyze the sinapoyl anthocyanin synthesis-related genes in plants, such as genes encoding UGTs and serine carboxypeptidase. We speculated that sinapoyl anthocyanin biosynthesis was associated with the activities of certain enzymes, including chalcone flavonone isomerase-like, hydroxycinnamoyltransferase 1, UGT-83A1, UGT-88B1 isoform X1, serine carboxypeptidase-like 18 isoform X3, and serine carboxypeptidase-like 18.
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spelling pubmed-72105142020-05-15 Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale Ren, Zhiyao Qiu, Fangning Wang, Yinjie Yu, Wenxia Liu, Chenxing Sun, Yangyang Wang, Yawen Zhang, Xiaofeng Xing, Shangping Tao, Shengchang Huang, Yuechun Liu, Guoxiong Wei, Zhaofeng Yu, Baiyin Du, Shuxiu Lei, Zhouxi Wei, Gang Biomed Res Int Research Article Anthocyanins, a group of flavonoids, are widely present in plants and determine the colors of the peels of stems, fruits, and flowers. In this study, we used UHPLC-ESI-MS to identify anthocyanins in the herbal plant Dendrobium officinale, which has been used for centuries in China. The results indicated that the total anthocyanin content in samples from Guangxi was the highest. Seven anthocyanins were identified, and the fragmentation pathways were proposed from D. officinale. Most of the identified anthocyanins were composed of cyanidin and sinapoyl groups. We also carried out that the sinapoyl group had active sites on breast cancer receptors by using Schrödinger. The relative levels of the 7 anthocyanins in the samples from the three locations were determined. Transcriptomic analysis was used to analyze the sinapoyl anthocyanin synthesis-related genes in plants, such as genes encoding UGTs and serine carboxypeptidase. We speculated that sinapoyl anthocyanin biosynthesis was associated with the activities of certain enzymes, including chalcone flavonone isomerase-like, hydroxycinnamoyltransferase 1, UGT-83A1, UGT-88B1 isoform X1, serine carboxypeptidase-like 18 isoform X3, and serine carboxypeptidase-like 18. Hindawi 2020-04-29 /pmc/articles/PMC7210514/ /pubmed/32420359 http://dx.doi.org/10.1155/2020/6512895 Text en Copyright © 2020 Zhiyao Ren et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Ren, Zhiyao
Qiu, Fangning
Wang, Yinjie
Yu, Wenxia
Liu, Chenxing
Sun, Yangyang
Wang, Yawen
Zhang, Xiaofeng
Xing, Shangping
Tao, Shengchang
Huang, Yuechun
Liu, Guoxiong
Wei, Zhaofeng
Yu, Baiyin
Du, Shuxiu
Lei, Zhouxi
Wei, Gang
Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale
title Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale
title_full Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale
title_fullStr Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale
title_full_unstemmed Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale
title_short Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale
title_sort network analysis of transcriptome and lc-ms reveals a possible biosynthesis pathway of anthocyanins in dendrobium officinale
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7210514/
https://www.ncbi.nlm.nih.gov/pubmed/32420359
http://dx.doi.org/10.1155/2020/6512895
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