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Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale
Anthocyanins, a group of flavonoids, are widely present in plants and determine the colors of the peels of stems, fruits, and flowers. In this study, we used UHPLC-ESI-MS to identify anthocyanins in the herbal plant Dendrobium officinale, which has been used for centuries in China. The results indic...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7210514/ https://www.ncbi.nlm.nih.gov/pubmed/32420359 http://dx.doi.org/10.1155/2020/6512895 |
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author | Ren, Zhiyao Qiu, Fangning Wang, Yinjie Yu, Wenxia Liu, Chenxing Sun, Yangyang Wang, Yawen Zhang, Xiaofeng Xing, Shangping Tao, Shengchang Huang, Yuechun Liu, Guoxiong Wei, Zhaofeng Yu, Baiyin Du, Shuxiu Lei, Zhouxi Wei, Gang |
author_facet | Ren, Zhiyao Qiu, Fangning Wang, Yinjie Yu, Wenxia Liu, Chenxing Sun, Yangyang Wang, Yawen Zhang, Xiaofeng Xing, Shangping Tao, Shengchang Huang, Yuechun Liu, Guoxiong Wei, Zhaofeng Yu, Baiyin Du, Shuxiu Lei, Zhouxi Wei, Gang |
author_sort | Ren, Zhiyao |
collection | PubMed |
description | Anthocyanins, a group of flavonoids, are widely present in plants and determine the colors of the peels of stems, fruits, and flowers. In this study, we used UHPLC-ESI-MS to identify anthocyanins in the herbal plant Dendrobium officinale, which has been used for centuries in China. The results indicated that the total anthocyanin content in samples from Guangxi was the highest. Seven anthocyanins were identified, and the fragmentation pathways were proposed from D. officinale. Most of the identified anthocyanins were composed of cyanidin and sinapoyl groups. We also carried out that the sinapoyl group had active sites on breast cancer receptors by using Schrödinger. The relative levels of the 7 anthocyanins in the samples from the three locations were determined. Transcriptomic analysis was used to analyze the sinapoyl anthocyanin synthesis-related genes in plants, such as genes encoding UGTs and serine carboxypeptidase. We speculated that sinapoyl anthocyanin biosynthesis was associated with the activities of certain enzymes, including chalcone flavonone isomerase-like, hydroxycinnamoyltransferase 1, UGT-83A1, UGT-88B1 isoform X1, serine carboxypeptidase-like 18 isoform X3, and serine carboxypeptidase-like 18. |
format | Online Article Text |
id | pubmed-7210514 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-72105142020-05-15 Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale Ren, Zhiyao Qiu, Fangning Wang, Yinjie Yu, Wenxia Liu, Chenxing Sun, Yangyang Wang, Yawen Zhang, Xiaofeng Xing, Shangping Tao, Shengchang Huang, Yuechun Liu, Guoxiong Wei, Zhaofeng Yu, Baiyin Du, Shuxiu Lei, Zhouxi Wei, Gang Biomed Res Int Research Article Anthocyanins, a group of flavonoids, are widely present in plants and determine the colors of the peels of stems, fruits, and flowers. In this study, we used UHPLC-ESI-MS to identify anthocyanins in the herbal plant Dendrobium officinale, which has been used for centuries in China. The results indicated that the total anthocyanin content in samples from Guangxi was the highest. Seven anthocyanins were identified, and the fragmentation pathways were proposed from D. officinale. Most of the identified anthocyanins were composed of cyanidin and sinapoyl groups. We also carried out that the sinapoyl group had active sites on breast cancer receptors by using Schrödinger. The relative levels of the 7 anthocyanins in the samples from the three locations were determined. Transcriptomic analysis was used to analyze the sinapoyl anthocyanin synthesis-related genes in plants, such as genes encoding UGTs and serine carboxypeptidase. We speculated that sinapoyl anthocyanin biosynthesis was associated with the activities of certain enzymes, including chalcone flavonone isomerase-like, hydroxycinnamoyltransferase 1, UGT-83A1, UGT-88B1 isoform X1, serine carboxypeptidase-like 18 isoform X3, and serine carboxypeptidase-like 18. Hindawi 2020-04-29 /pmc/articles/PMC7210514/ /pubmed/32420359 http://dx.doi.org/10.1155/2020/6512895 Text en Copyright © 2020 Zhiyao Ren et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Ren, Zhiyao Qiu, Fangning Wang, Yinjie Yu, Wenxia Liu, Chenxing Sun, Yangyang Wang, Yawen Zhang, Xiaofeng Xing, Shangping Tao, Shengchang Huang, Yuechun Liu, Guoxiong Wei, Zhaofeng Yu, Baiyin Du, Shuxiu Lei, Zhouxi Wei, Gang Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale |
title | Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale |
title_full | Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale |
title_fullStr | Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale |
title_full_unstemmed | Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale |
title_short | Network Analysis of Transcriptome and LC-MS Reveals a Possible Biosynthesis Pathway of Anthocyanins in Dendrobium officinale |
title_sort | network analysis of transcriptome and lc-ms reveals a possible biosynthesis pathway of anthocyanins in dendrobium officinale |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7210514/ https://www.ncbi.nlm.nih.gov/pubmed/32420359 http://dx.doi.org/10.1155/2020/6512895 |
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