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Minimal lactazole scaffold for in vitro thiopeptide bioengineering

Lactazole A is a cryptic thiopeptide from Streptomyces lactacystinaeus, encoded by a compact 9.8 kb biosynthetic gene cluster. Here, we establish a platform for in vitro biosynthesis of lactazole A, referred to as the FIT-Laz system, via a combination of the flexible in vitro translation (FIT) syste...

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Autores principales: Vinogradov, Alexander A., Shimomura, Morito, Goto, Yuki, Ozaki, Taro, Asamizu, Shumpei, Sugai, Yoshinori, Suga, Hiroaki, Onaka, Hiroyasu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7210931/
https://www.ncbi.nlm.nih.gov/pubmed/32385237
http://dx.doi.org/10.1038/s41467-020-16145-4
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author Vinogradov, Alexander A.
Shimomura, Morito
Goto, Yuki
Ozaki, Taro
Asamizu, Shumpei
Sugai, Yoshinori
Suga, Hiroaki
Onaka, Hiroyasu
author_facet Vinogradov, Alexander A.
Shimomura, Morito
Goto, Yuki
Ozaki, Taro
Asamizu, Shumpei
Sugai, Yoshinori
Suga, Hiroaki
Onaka, Hiroyasu
author_sort Vinogradov, Alexander A.
collection PubMed
description Lactazole A is a cryptic thiopeptide from Streptomyces lactacystinaeus, encoded by a compact 9.8 kb biosynthetic gene cluster. Here, we establish a platform for in vitro biosynthesis of lactazole A, referred to as the FIT-Laz system, via a combination of the flexible in vitro translation (FIT) system with recombinantly produced lactazole biosynthetic enzymes. Systematic dissection of lactazole biosynthesis reveals remarkable substrate tolerance of the biosynthetic enzymes and leads to the development of the minimal lactazole scaffold, a construct requiring only 6 post-translational modifications for macrocyclization. Efficient assembly of such minimal thiopeptides with FIT-Laz opens access to diverse lactazole analogs with 10 consecutive mutations, 14- to 62-membered macrocycles, and 18 amino acid-long tail regions, as well as to hybrid thiopeptides containing non-proteinogenic amino acids. This work suggests that the minimal lactazole scaffold is amenable to extensive bioengineering and opens possibilities to explore untapped chemical space of thiopeptides.
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spelling pubmed-72109312020-05-13 Minimal lactazole scaffold for in vitro thiopeptide bioengineering Vinogradov, Alexander A. Shimomura, Morito Goto, Yuki Ozaki, Taro Asamizu, Shumpei Sugai, Yoshinori Suga, Hiroaki Onaka, Hiroyasu Nat Commun Article Lactazole A is a cryptic thiopeptide from Streptomyces lactacystinaeus, encoded by a compact 9.8 kb biosynthetic gene cluster. Here, we establish a platform for in vitro biosynthesis of lactazole A, referred to as the FIT-Laz system, via a combination of the flexible in vitro translation (FIT) system with recombinantly produced lactazole biosynthetic enzymes. Systematic dissection of lactazole biosynthesis reveals remarkable substrate tolerance of the biosynthetic enzymes and leads to the development of the minimal lactazole scaffold, a construct requiring only 6 post-translational modifications for macrocyclization. Efficient assembly of such minimal thiopeptides with FIT-Laz opens access to diverse lactazole analogs with 10 consecutive mutations, 14- to 62-membered macrocycles, and 18 amino acid-long tail regions, as well as to hybrid thiopeptides containing non-proteinogenic amino acids. This work suggests that the minimal lactazole scaffold is amenable to extensive bioengineering and opens possibilities to explore untapped chemical space of thiopeptides. Nature Publishing Group UK 2020-05-08 /pmc/articles/PMC7210931/ /pubmed/32385237 http://dx.doi.org/10.1038/s41467-020-16145-4 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Vinogradov, Alexander A.
Shimomura, Morito
Goto, Yuki
Ozaki, Taro
Asamizu, Shumpei
Sugai, Yoshinori
Suga, Hiroaki
Onaka, Hiroyasu
Minimal lactazole scaffold for in vitro thiopeptide bioengineering
title Minimal lactazole scaffold for in vitro thiopeptide bioengineering
title_full Minimal lactazole scaffold for in vitro thiopeptide bioengineering
title_fullStr Minimal lactazole scaffold for in vitro thiopeptide bioengineering
title_full_unstemmed Minimal lactazole scaffold for in vitro thiopeptide bioengineering
title_short Minimal lactazole scaffold for in vitro thiopeptide bioengineering
title_sort minimal lactazole scaffold for in vitro thiopeptide bioengineering
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7210931/
https://www.ncbi.nlm.nih.gov/pubmed/32385237
http://dx.doi.org/10.1038/s41467-020-16145-4
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