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Biological and statistical interpretation of size-at-age, mixed-effects models of growth

The differences in life-history traits and processes between organisms living in the same or different populations contribute to their ecological and evolutionary dynamics. We developed mixed-effect model formulations of the popular size-at-age von Bertalanffy and Gompertz growth functions to estima...

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Autores principales: Vincenzi, Simone, Jesensek, Dusan, Crivelli, Alain J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7211857/
https://www.ncbi.nlm.nih.gov/pubmed/32431890
http://dx.doi.org/10.1098/rsos.192146
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author Vincenzi, Simone
Jesensek, Dusan
Crivelli, Alain J.
author_facet Vincenzi, Simone
Jesensek, Dusan
Crivelli, Alain J.
author_sort Vincenzi, Simone
collection PubMed
description The differences in life-history traits and processes between organisms living in the same or different populations contribute to their ecological and evolutionary dynamics. We developed mixed-effect model formulations of the popular size-at-age von Bertalanffy and Gompertz growth functions to estimate individual and group variation in body growth, using as a model system four freshwater fish populations, where tagged individuals were sampled for more than 10 years. We used the software Template Model Builder to estimate the parameters of the mixed-effect growth models. Tests on data that were not used to estimate model parameters showed good predictions of individual growth trajectories using the mixed-effects models and starting from one single observation of body size early in life; the best models had R(2) > 0.80 over more than 500 predictions. Estimates of asymptotic size from the Gompertz and von Bertalanffy models were not significantly correlated, but their predictions of size-at-age of individuals were strongly correlated (r > 0.99), which suggests that choosing between the best models of the two growth functions would have negligible effects on the predictions of size-at-age of individuals. Model results pointed to size ranks that are largely maintained throughout the lifetime of individuals in all populations.
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spelling pubmed-72118572020-05-19 Biological and statistical interpretation of size-at-age, mixed-effects models of growth Vincenzi, Simone Jesensek, Dusan Crivelli, Alain J. R Soc Open Sci Ecology, Conservation, and Global Change Biology The differences in life-history traits and processes between organisms living in the same or different populations contribute to their ecological and evolutionary dynamics. We developed mixed-effect model formulations of the popular size-at-age von Bertalanffy and Gompertz growth functions to estimate individual and group variation in body growth, using as a model system four freshwater fish populations, where tagged individuals were sampled for more than 10 years. We used the software Template Model Builder to estimate the parameters of the mixed-effect growth models. Tests on data that were not used to estimate model parameters showed good predictions of individual growth trajectories using the mixed-effects models and starting from one single observation of body size early in life; the best models had R(2) > 0.80 over more than 500 predictions. Estimates of asymptotic size from the Gompertz and von Bertalanffy models were not significantly correlated, but their predictions of size-at-age of individuals were strongly correlated (r > 0.99), which suggests that choosing between the best models of the two growth functions would have negligible effects on the predictions of size-at-age of individuals. Model results pointed to size ranks that are largely maintained throughout the lifetime of individuals in all populations. The Royal Society 2020-04-08 /pmc/articles/PMC7211857/ /pubmed/32431890 http://dx.doi.org/10.1098/rsos.192146 Text en © 2020 The Authors. http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Ecology, Conservation, and Global Change Biology
Vincenzi, Simone
Jesensek, Dusan
Crivelli, Alain J.
Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title_full Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title_fullStr Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title_full_unstemmed Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title_short Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title_sort biological and statistical interpretation of size-at-age, mixed-effects models of growth
topic Ecology, Conservation, and Global Change Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7211857/
https://www.ncbi.nlm.nih.gov/pubmed/32431890
http://dx.doi.org/10.1098/rsos.192146
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