Cargando…
The SLC Family Are Candidate Diagnostic and Prognostic Biomarkers in Clear Cell Renal Cell Carcinoma
Clear cell renal cell carcinoma (ccRCC) is the most common lethal subtype of renal cancer, and changes in tumor metabolism play a key role in its development. Solute carriers (SLCs) are important in the transport of small molecules in humans, and defects in SLC transporters can lead to serious disea...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7212275/ https://www.ncbi.nlm.nih.gov/pubmed/32461965 http://dx.doi.org/10.1155/2020/1932948 |
_version_ | 1783531588595744768 |
---|---|
author | Kang, Weiting Zhang, Meng Wang, Qiang Gu, Da Huang, Zhilong Wang, Hanbo Xiang, Yuzhu Xia, Qinghua Cui, Zilian Jin, Xunbo |
author_facet | Kang, Weiting Zhang, Meng Wang, Qiang Gu, Da Huang, Zhilong Wang, Hanbo Xiang, Yuzhu Xia, Qinghua Cui, Zilian Jin, Xunbo |
author_sort | Kang, Weiting |
collection | PubMed |
description | Clear cell renal cell carcinoma (ccRCC) is the most common lethal subtype of renal cancer, and changes in tumor metabolism play a key role in its development. Solute carriers (SLCs) are important in the transport of small molecules in humans, and defects in SLC transporters can lead to serious diseases. The expression patterns and prognostic values of SLC family transporters in the development of ccRCC are still unclear. The current study analyzed the expression levels of SLC family members and their correlation with prognosis in ccRCC patients with data from Oncomine, Gene Expression Profiling Interactive Analysis (GEPIA), The Cancer Genome Atlas (TCGA), cBioPortal, the Human Protein Atlas (HPA), the International Cancer Genome Consortium (ICGC), and the Gene Expression Omnibus (GEO). We found that the mRNA expression levels of SLC22A6, SLC22A7, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 were significantly lower in ccRCC tissues than in normal tissues and the protein expression levels of SLC22A6, SLC22A7, SLC22A13, and SLC34A1 were also significantly lower. Except for SLC22A7, the expression levels of SLC22A6, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 were correlated with the clinical stage of ccRCC patients. The lower the expression levels of SLC22A6, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 were, the later the clinical stage of ccRCC patients was. Further experiments revealed that the expression levels of SLC22A6, SLC22A7, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 were significantly associated with overall survival (OS) and disease-free survival (DFS) in ccRCC patients. High SLC22A6, SLC22A7, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 expression predicted improved OS and DFS. Finally, GSE53757 and ICGC were used to revalidate the differential expression and clinical prognostic value. This study suggests that SLC22A6, SLC22A7, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 may be potential targets for the clinical diagnosis, prognosis, and treatment of ccRCC patients. |
format | Online Article Text |
id | pubmed-7212275 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-72122752020-05-26 The SLC Family Are Candidate Diagnostic and Prognostic Biomarkers in Clear Cell Renal Cell Carcinoma Kang, Weiting Zhang, Meng Wang, Qiang Gu, Da Huang, Zhilong Wang, Hanbo Xiang, Yuzhu Xia, Qinghua Cui, Zilian Jin, Xunbo Biomed Res Int Research Article Clear cell renal cell carcinoma (ccRCC) is the most common lethal subtype of renal cancer, and changes in tumor metabolism play a key role in its development. Solute carriers (SLCs) are important in the transport of small molecules in humans, and defects in SLC transporters can lead to serious diseases. The expression patterns and prognostic values of SLC family transporters in the development of ccRCC are still unclear. The current study analyzed the expression levels of SLC family members and their correlation with prognosis in ccRCC patients with data from Oncomine, Gene Expression Profiling Interactive Analysis (GEPIA), The Cancer Genome Atlas (TCGA), cBioPortal, the Human Protein Atlas (HPA), the International Cancer Genome Consortium (ICGC), and the Gene Expression Omnibus (GEO). We found that the mRNA expression levels of SLC22A6, SLC22A7, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 were significantly lower in ccRCC tissues than in normal tissues and the protein expression levels of SLC22A6, SLC22A7, SLC22A13, and SLC34A1 were also significantly lower. Except for SLC22A7, the expression levels of SLC22A6, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 were correlated with the clinical stage of ccRCC patients. The lower the expression levels of SLC22A6, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 were, the later the clinical stage of ccRCC patients was. Further experiments revealed that the expression levels of SLC22A6, SLC22A7, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 were significantly associated with overall survival (OS) and disease-free survival (DFS) in ccRCC patients. High SLC22A6, SLC22A7, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 expression predicted improved OS and DFS. Finally, GSE53757 and ICGC were used to revalidate the differential expression and clinical prognostic value. This study suggests that SLC22A6, SLC22A7, SLC22A13, SLC25A4, SLC34A1, and SLC44A4 may be potential targets for the clinical diagnosis, prognosis, and treatment of ccRCC patients. Hindawi 2020-05-01 /pmc/articles/PMC7212275/ /pubmed/32461965 http://dx.doi.org/10.1155/2020/1932948 Text en Copyright © 2020 Weiting Kang et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Kang, Weiting Zhang, Meng Wang, Qiang Gu, Da Huang, Zhilong Wang, Hanbo Xiang, Yuzhu Xia, Qinghua Cui, Zilian Jin, Xunbo The SLC Family Are Candidate Diagnostic and Prognostic Biomarkers in Clear Cell Renal Cell Carcinoma |
title | The SLC Family Are Candidate Diagnostic and Prognostic Biomarkers in Clear Cell Renal Cell Carcinoma |
title_full | The SLC Family Are Candidate Diagnostic and Prognostic Biomarkers in Clear Cell Renal Cell Carcinoma |
title_fullStr | The SLC Family Are Candidate Diagnostic and Prognostic Biomarkers in Clear Cell Renal Cell Carcinoma |
title_full_unstemmed | The SLC Family Are Candidate Diagnostic and Prognostic Biomarkers in Clear Cell Renal Cell Carcinoma |
title_short | The SLC Family Are Candidate Diagnostic and Prognostic Biomarkers in Clear Cell Renal Cell Carcinoma |
title_sort | slc family are candidate diagnostic and prognostic biomarkers in clear cell renal cell carcinoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7212275/ https://www.ncbi.nlm.nih.gov/pubmed/32461965 http://dx.doi.org/10.1155/2020/1932948 |
work_keys_str_mv | AT kangweiting theslcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT zhangmeng theslcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT wangqiang theslcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT guda theslcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT huangzhilong theslcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT wanghanbo theslcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT xiangyuzhu theslcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT xiaqinghua theslcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT cuizilian theslcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT jinxunbo theslcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT kangweiting slcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT zhangmeng slcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT wangqiang slcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT guda slcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT huangzhilong slcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT wanghanbo slcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT xiangyuzhu slcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT xiaqinghua slcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT cuizilian slcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma AT jinxunbo slcfamilyarecandidatediagnosticandprognosticbiomarkersinclearcellrenalcellcarcinoma |