Cargando…

The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold

Type IV filaments (T4F), which are helical assemblies of type IV pilins, constitute a superfamily of filamentous nanomachines virtually ubiquitous in prokaryotes that mediate a wide variety of functions. The competence (Com) pilus is a widespread T4F, mediating DNA uptake (the first step in natural...

Descripción completa

Detalles Bibliográficos
Autores principales: Sheppard, Devon, Berry, Jamie-Lee, Denise, Rémi, Rocha, Eduardo P. C., Matthews, Steve, Pelicic, Vladimir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Biochemistry and Molecular Biology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7212644/
https://www.ncbi.nlm.nih.gov/pubmed/32273343
http://dx.doi.org/10.1074/jbc.RA120.013316
_version_ 1783531655241138176
author Sheppard, Devon
Berry, Jamie-Lee
Denise, Rémi
Rocha, Eduardo P. C.
Matthews, Steve
Pelicic, Vladimir
author_facet Sheppard, Devon
Berry, Jamie-Lee
Denise, Rémi
Rocha, Eduardo P. C.
Matthews, Steve
Pelicic, Vladimir
author_sort Sheppard, Devon
collection PubMed
description Type IV filaments (T4F), which are helical assemblies of type IV pilins, constitute a superfamily of filamentous nanomachines virtually ubiquitous in prokaryotes that mediate a wide variety of functions. The competence (Com) pilus is a widespread T4F, mediating DNA uptake (the first step in natural transformation) in bacteria with one membrane (monoderms), an important mechanism of horizontal gene transfer. Here, we report the results of genomic, phylogenetic, and structural analyses of ComGC, the major pilin subunit of Com pili. By performing a global comparative analysis, we show that Com pili genes are virtually ubiquitous in Bacilli, a major monoderm class of Firmicutes. This also revealed that ComGC displays extensive sequence conservation, defining a monophyletic group among type IV pilins. We further report ComGC solution structures from two naturally competent human pathogens, Streptococcus sanguinis (ComGC(SS)) and Streptococcus pneumoniae (ComGC(SP)), revealing that this pilin displays extensive structural conservation. Strikingly, ComGC(SS) and ComGC(SP) exhibit a novel type IV pilin fold that is purely helical. Results from homology modeling analyses suggest that the unusual structure of ComGC is compatible with helical filament assembly. Because ComGC displays such a widespread distribution, these results have implications for hundreds of monoderm species.
format Online
Article
Text
id pubmed-7212644
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher American Society for Biochemistry and Molecular Biology
record_format MEDLINE/PubMed
spelling pubmed-72126442020-05-18 The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold Sheppard, Devon Berry, Jamie-Lee Denise, Rémi Rocha, Eduardo P. C. Matthews, Steve Pelicic, Vladimir J Biol Chem Microbiology Type IV filaments (T4F), which are helical assemblies of type IV pilins, constitute a superfamily of filamentous nanomachines virtually ubiquitous in prokaryotes that mediate a wide variety of functions. The competence (Com) pilus is a widespread T4F, mediating DNA uptake (the first step in natural transformation) in bacteria with one membrane (monoderms), an important mechanism of horizontal gene transfer. Here, we report the results of genomic, phylogenetic, and structural analyses of ComGC, the major pilin subunit of Com pili. By performing a global comparative analysis, we show that Com pili genes are virtually ubiquitous in Bacilli, a major monoderm class of Firmicutes. This also revealed that ComGC displays extensive sequence conservation, defining a monophyletic group among type IV pilins. We further report ComGC solution structures from two naturally competent human pathogens, Streptococcus sanguinis (ComGC(SS)) and Streptococcus pneumoniae (ComGC(SP)), revealing that this pilin displays extensive structural conservation. Strikingly, ComGC(SS) and ComGC(SP) exhibit a novel type IV pilin fold that is purely helical. Results from homology modeling analyses suggest that the unusual structure of ComGC is compatible with helical filament assembly. Because ComGC displays such a widespread distribution, these results have implications for hundreds of monoderm species. American Society for Biochemistry and Molecular Biology 2020-05-08 2020-04-09 /pmc/articles/PMC7212644/ /pubmed/32273343 http://dx.doi.org/10.1074/jbc.RA120.013316 Text en © 2020 Sheppard et al. Author's Choice—Final version open access under the terms of the Creative Commons CC-BY license (http://creativecommons.org/licenses/by/4.0) .
spellingShingle Microbiology
Sheppard, Devon
Berry, Jamie-Lee
Denise, Rémi
Rocha, Eduardo P. C.
Matthews, Steve
Pelicic, Vladimir
The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold
title The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold
title_full The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold
title_fullStr The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold
title_full_unstemmed The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold
title_short The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold
title_sort major subunit of widespread competence pili exhibits a novel and conserved type iv pilin fold
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7212644/
https://www.ncbi.nlm.nih.gov/pubmed/32273343
http://dx.doi.org/10.1074/jbc.RA120.013316
work_keys_str_mv AT shepparddevon themajorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT berryjamielee themajorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT deniseremi themajorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT rochaeduardopc themajorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT matthewssteve themajorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT pelicicvladimir themajorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT shepparddevon majorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT berryjamielee majorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT deniseremi majorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT rochaeduardopc majorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT matthewssteve majorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold
AT pelicicvladimir majorsubunitofwidespreadcompetencepiliexhibitsanovelandconservedtypeivpilinfold