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Characteristics of the soil microbial community in the forestland of Camellia oleifera
Characterizing soil microbial community is important for forest ecosystem management and microbial utilization. The microbial community in the soil beneath Camellia oleifera, an important woody edible oil tree in China, has not been reported before. Here, we used Illumina sequencing of 16S and ITS r...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7213003/ https://www.ncbi.nlm.nih.gov/pubmed/32426184 http://dx.doi.org/10.7717/peerj.9117 |
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author | Zhang, Peng Cui, Zhiyi Guo, Mengqing Xi, Ruchun |
author_facet | Zhang, Peng Cui, Zhiyi Guo, Mengqing Xi, Ruchun |
author_sort | Zhang, Peng |
collection | PubMed |
description | Characterizing soil microbial community is important for forest ecosystem management and microbial utilization. The microbial community in the soil beneath Camellia oleifera, an important woody edible oil tree in China, has not been reported before. Here, we used Illumina sequencing of 16S and ITS rRNA genes to study the species diversity of microorganisms in C. oleifera forest land in South China. The results showed that the rhizosphere soil had higher physicochemical properties, enzyme activities and microbial biomass than did the non-rhizosphere soil. The rhizosphere soil microorganisms had a higher carbon source utilization capacity than the non-rhizosphere soil microorganisms, and attained the highest utilization capacity in summer. The soil microbial community of C. oleifera was characterized by rich ester and amino acid carbon sources that played major roles in the principal functional components of the community. In summer, soil microbes were abundant in species richness and very active in community function. Rhizosphere microorganisms were more diverse than non-root systems in species diversity, which was associated with soil pH, Available phosphorous (AP) and Urease (URE). These results indicated that microbial resources were rich in rhizosphere soil. A priority should be given to the rhizosphere microorganisms in the growing season in developing and utilizing soil microorganisms in C. oleifera plantation. It is possible to promote the growth of C. oleifera by changing soil microbial community, including carbon source species, pH, AP, and URE. Our findings provide valuable information to guide microbial isolation and culturing to manage C. oleifera land. |
format | Online Article Text |
id | pubmed-7213003 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72130032020-05-18 Characteristics of the soil microbial community in the forestland of Camellia oleifera Zhang, Peng Cui, Zhiyi Guo, Mengqing Xi, Ruchun PeerJ Ecology Characterizing soil microbial community is important for forest ecosystem management and microbial utilization. The microbial community in the soil beneath Camellia oleifera, an important woody edible oil tree in China, has not been reported before. Here, we used Illumina sequencing of 16S and ITS rRNA genes to study the species diversity of microorganisms in C. oleifera forest land in South China. The results showed that the rhizosphere soil had higher physicochemical properties, enzyme activities and microbial biomass than did the non-rhizosphere soil. The rhizosphere soil microorganisms had a higher carbon source utilization capacity than the non-rhizosphere soil microorganisms, and attained the highest utilization capacity in summer. The soil microbial community of C. oleifera was characterized by rich ester and amino acid carbon sources that played major roles in the principal functional components of the community. In summer, soil microbes were abundant in species richness and very active in community function. Rhizosphere microorganisms were more diverse than non-root systems in species diversity, which was associated with soil pH, Available phosphorous (AP) and Urease (URE). These results indicated that microbial resources were rich in rhizosphere soil. A priority should be given to the rhizosphere microorganisms in the growing season in developing and utilizing soil microorganisms in C. oleifera plantation. It is possible to promote the growth of C. oleifera by changing soil microbial community, including carbon source species, pH, AP, and URE. Our findings provide valuable information to guide microbial isolation and culturing to manage C. oleifera land. PeerJ Inc. 2020-05-08 /pmc/articles/PMC7213003/ /pubmed/32426184 http://dx.doi.org/10.7717/peerj.9117 Text en ©2020 Zhang et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Ecology Zhang, Peng Cui, Zhiyi Guo, Mengqing Xi, Ruchun Characteristics of the soil microbial community in the forestland of Camellia oleifera |
title | Characteristics of the soil microbial community in the forestland of Camellia oleifera |
title_full | Characteristics of the soil microbial community in the forestland of Camellia oleifera |
title_fullStr | Characteristics of the soil microbial community in the forestland of Camellia oleifera |
title_full_unstemmed | Characteristics of the soil microbial community in the forestland of Camellia oleifera |
title_short | Characteristics of the soil microbial community in the forestland of Camellia oleifera |
title_sort | characteristics of the soil microbial community in the forestland of camellia oleifera |
topic | Ecology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7213003/ https://www.ncbi.nlm.nih.gov/pubmed/32426184 http://dx.doi.org/10.7717/peerj.9117 |
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