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Metabolic reprogramming‐associated genes predict overall survival for rectal cancer
Metabolic reprogramming has become a hot topic recently in the regulation of tumour biology. Although hundreds of altered metabolic genes have been reported to be associated with tumour development and progression, the important prognostic role of these metabolic genes remains unknown. We downloaded...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7214181/ https://www.ncbi.nlm.nih.gov/pubmed/32285560 http://dx.doi.org/10.1111/jcmm.15254 |
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author | Zhang, Zhong‐Yi Yao, Qing‐Zhi Liu, Hui‐Yong Guo, Qiao‐Nan Qiu, Peng‐Jun Chen, Jian‐Peng Lin, Jian‐Qing |
author_facet | Zhang, Zhong‐Yi Yao, Qing‐Zhi Liu, Hui‐Yong Guo, Qiao‐Nan Qiu, Peng‐Jun Chen, Jian‐Peng Lin, Jian‐Qing |
author_sort | Zhang, Zhong‐Yi |
collection | PubMed |
description | Metabolic reprogramming has become a hot topic recently in the regulation of tumour biology. Although hundreds of altered metabolic genes have been reported to be associated with tumour development and progression, the important prognostic role of these metabolic genes remains unknown. We downloaded messenger RNA expression profiles and clinicopathological data from The Cancer Genome Atlas and the Gene Expression Omnibus database to uncover the prognostic role of these metabolic genes. Univariate Cox regression analysis and lasso Cox regression model were utilized in this study to screen prognostic associated metabolic genes. Patients with high‐risk demonstrated significantly poorer survival outcomes than patients with low‐risk in the TCGA database. Also, patients with high‐risk still showed significantly poorer survival outcomes than patients with low‐risk in the GEO database. What is more, gene set enrichment analyses were performed in this study to uncover significantly enriched GO terms and pathways in order to help identify potential underlying mechanisms. Our study identified some survival‐related metabolic genes for rectal cancer prognosis prediction. These genes might play essential roles in the regulation of metabolic microenvironment and in providing significant potential biomarkers in metabolic treatment. |
format | Online Article Text |
id | pubmed-7214181 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72141812020-05-13 Metabolic reprogramming‐associated genes predict overall survival for rectal cancer Zhang, Zhong‐Yi Yao, Qing‐Zhi Liu, Hui‐Yong Guo, Qiao‐Nan Qiu, Peng‐Jun Chen, Jian‐Peng Lin, Jian‐Qing J Cell Mol Med Original Articles Metabolic reprogramming has become a hot topic recently in the regulation of tumour biology. Although hundreds of altered metabolic genes have been reported to be associated with tumour development and progression, the important prognostic role of these metabolic genes remains unknown. We downloaded messenger RNA expression profiles and clinicopathological data from The Cancer Genome Atlas and the Gene Expression Omnibus database to uncover the prognostic role of these metabolic genes. Univariate Cox regression analysis and lasso Cox regression model were utilized in this study to screen prognostic associated metabolic genes. Patients with high‐risk demonstrated significantly poorer survival outcomes than patients with low‐risk in the TCGA database. Also, patients with high‐risk still showed significantly poorer survival outcomes than patients with low‐risk in the GEO database. What is more, gene set enrichment analyses were performed in this study to uncover significantly enriched GO terms and pathways in order to help identify potential underlying mechanisms. Our study identified some survival‐related metabolic genes for rectal cancer prognosis prediction. These genes might play essential roles in the regulation of metabolic microenvironment and in providing significant potential biomarkers in metabolic treatment. John Wiley and Sons Inc. 2020-04-13 2020-05 /pmc/articles/PMC7214181/ /pubmed/32285560 http://dx.doi.org/10.1111/jcmm.15254 Text en © 2020 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Zhang, Zhong‐Yi Yao, Qing‐Zhi Liu, Hui‐Yong Guo, Qiao‐Nan Qiu, Peng‐Jun Chen, Jian‐Peng Lin, Jian‐Qing Metabolic reprogramming‐associated genes predict overall survival for rectal cancer |
title | Metabolic reprogramming‐associated genes predict overall survival for rectal cancer |
title_full | Metabolic reprogramming‐associated genes predict overall survival for rectal cancer |
title_fullStr | Metabolic reprogramming‐associated genes predict overall survival for rectal cancer |
title_full_unstemmed | Metabolic reprogramming‐associated genes predict overall survival for rectal cancer |
title_short | Metabolic reprogramming‐associated genes predict overall survival for rectal cancer |
title_sort | metabolic reprogramming‐associated genes predict overall survival for rectal cancer |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7214181/ https://www.ncbi.nlm.nih.gov/pubmed/32285560 http://dx.doi.org/10.1111/jcmm.15254 |
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