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Linear and Non-linear Dimensionality-Reduction Techniques on Full Hand Kinematics

The purpose of this study was to find a parsimonious representation of hand kinematics data that could facilitate prosthetic hand control. Principal Component Analysis (PCA) and a non-linear Autoencoder Network (nAEN) were compared in their effectiveness at capturing the essential characteristics of...

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Autores principales: Portnova-Fahreeva, Alexandra A., Rizzoglio, Fabio, Nisky, Ilana, Casadio, Maura, Mussa-Ivaldi, Ferdinando A., Rombokas, Eric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7214755/
https://www.ncbi.nlm.nih.gov/pubmed/32432105
http://dx.doi.org/10.3389/fbioe.2020.00429
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author Portnova-Fahreeva, Alexandra A.
Rizzoglio, Fabio
Nisky, Ilana
Casadio, Maura
Mussa-Ivaldi, Ferdinando A.
Rombokas, Eric
author_facet Portnova-Fahreeva, Alexandra A.
Rizzoglio, Fabio
Nisky, Ilana
Casadio, Maura
Mussa-Ivaldi, Ferdinando A.
Rombokas, Eric
author_sort Portnova-Fahreeva, Alexandra A.
collection PubMed
description The purpose of this study was to find a parsimonious representation of hand kinematics data that could facilitate prosthetic hand control. Principal Component Analysis (PCA) and a non-linear Autoencoder Network (nAEN) were compared in their effectiveness at capturing the essential characteristics of a wide spectrum of hand gestures and actions. Performance of the two methods was compared on (a) the ability to accurately reconstruct hand kinematic data from a latent manifold of reduced dimension, (b) variance distribution across latent dimensions, and (c) the separability of hand movements in compressed and reconstructed representations derived using a linear classifier. The nAEN exhibited higher performance than PCA in its ability to more accurately reconstruct hand kinematic data from a latent manifold of reduced dimension. Whereas, for two dimensions in the latent manifold, PCA was able to account for 78% of input data variance, nAEN accounted for 94%. In addition, the nAEN latent manifold was spanned by coordinates with more uniform share of signal variance compared to PCA. Lastly, the nAEN was able to produce a manifold of more separable movements than PCA, as different tasks, when reconstructed, were more distinguishable by a linear classifier, SoftMax regression. It is concluded that non-linear dimensionality reduction may offer a more effective platform than linear methods to control prosthetic hands.
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spelling pubmed-72147552020-05-19 Linear and Non-linear Dimensionality-Reduction Techniques on Full Hand Kinematics Portnova-Fahreeva, Alexandra A. Rizzoglio, Fabio Nisky, Ilana Casadio, Maura Mussa-Ivaldi, Ferdinando A. Rombokas, Eric Front Bioeng Biotechnol Bioengineering and Biotechnology The purpose of this study was to find a parsimonious representation of hand kinematics data that could facilitate prosthetic hand control. Principal Component Analysis (PCA) and a non-linear Autoencoder Network (nAEN) were compared in their effectiveness at capturing the essential characteristics of a wide spectrum of hand gestures and actions. Performance of the two methods was compared on (a) the ability to accurately reconstruct hand kinematic data from a latent manifold of reduced dimension, (b) variance distribution across latent dimensions, and (c) the separability of hand movements in compressed and reconstructed representations derived using a linear classifier. The nAEN exhibited higher performance than PCA in its ability to more accurately reconstruct hand kinematic data from a latent manifold of reduced dimension. Whereas, for two dimensions in the latent manifold, PCA was able to account for 78% of input data variance, nAEN accounted for 94%. In addition, the nAEN latent manifold was spanned by coordinates with more uniform share of signal variance compared to PCA. Lastly, the nAEN was able to produce a manifold of more separable movements than PCA, as different tasks, when reconstructed, were more distinguishable by a linear classifier, SoftMax regression. It is concluded that non-linear dimensionality reduction may offer a more effective platform than linear methods to control prosthetic hands. Frontiers Media S.A. 2020-05-05 /pmc/articles/PMC7214755/ /pubmed/32432105 http://dx.doi.org/10.3389/fbioe.2020.00429 Text en Copyright © 2020 Portnova-Fahreeva, Rizzoglio, Nisky, Casadio, Mussa-Ivaldi and Rombokas. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Portnova-Fahreeva, Alexandra A.
Rizzoglio, Fabio
Nisky, Ilana
Casadio, Maura
Mussa-Ivaldi, Ferdinando A.
Rombokas, Eric
Linear and Non-linear Dimensionality-Reduction Techniques on Full Hand Kinematics
title Linear and Non-linear Dimensionality-Reduction Techniques on Full Hand Kinematics
title_full Linear and Non-linear Dimensionality-Reduction Techniques on Full Hand Kinematics
title_fullStr Linear and Non-linear Dimensionality-Reduction Techniques on Full Hand Kinematics
title_full_unstemmed Linear and Non-linear Dimensionality-Reduction Techniques on Full Hand Kinematics
title_short Linear and Non-linear Dimensionality-Reduction Techniques on Full Hand Kinematics
title_sort linear and non-linear dimensionality-reduction techniques on full hand kinematics
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7214755/
https://www.ncbi.nlm.nih.gov/pubmed/32432105
http://dx.doi.org/10.3389/fbioe.2020.00429
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