Cargando…
Modified DNA Aptamers for C-Reactive Protein and Lactate Dehydrogenase-5 with Sub-Nanomolar Affinities
Human C-reactive protein (CRP) and lactate dehydrogenase are important markers in clinical laboratory testing—the former is used to detect in vivo inflammation, and the latter is used to detect cell necrosis and tissue destruction. We developed aptamers that bind to human CRP and human lactate dehyd...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7215426/ https://www.ncbi.nlm.nih.gov/pubmed/32294882 http://dx.doi.org/10.3390/ijms21082683 |
_version_ | 1783532184435425280 |
---|---|
author | Minagawa, Hirotaka Kataoka, Yuka Fujita, Hiroto Kuwahara, Masayasu Horii, Katsunori Shiratori, Ikuo Waga, Iwao |
author_facet | Minagawa, Hirotaka Kataoka, Yuka Fujita, Hiroto Kuwahara, Masayasu Horii, Katsunori Shiratori, Ikuo Waga, Iwao |
author_sort | Minagawa, Hirotaka |
collection | PubMed |
description | Human C-reactive protein (CRP) and lactate dehydrogenase are important markers in clinical laboratory testing—the former is used to detect in vivo inflammation, and the latter is used to detect cell necrosis and tissue destruction. We developed aptamers that bind to human CRP and human lactate dehydrogenase-5 (LDH-5) with high affinities (dissociation constants of 6.2 pM and 235 pM, respectively), applying the systematic evolution of ligands by exponential enrichment (SELEX) method, and by using a modified DNA library containing the following base-appended base modifications: analog adenine derivative at the fifth position of uracil (U(ad)), analog guanine derivative at the fifth position of uracil (U(gu)), and analog adenine derivative at the seventh position of adenine (A(ad)). A potential application of these aptamers as sensor elements includes high-sensitivity target detection in point-of-care testing. |
format | Online Article Text |
id | pubmed-7215426 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-72154262020-05-18 Modified DNA Aptamers for C-Reactive Protein and Lactate Dehydrogenase-5 with Sub-Nanomolar Affinities Minagawa, Hirotaka Kataoka, Yuka Fujita, Hiroto Kuwahara, Masayasu Horii, Katsunori Shiratori, Ikuo Waga, Iwao Int J Mol Sci Article Human C-reactive protein (CRP) and lactate dehydrogenase are important markers in clinical laboratory testing—the former is used to detect in vivo inflammation, and the latter is used to detect cell necrosis and tissue destruction. We developed aptamers that bind to human CRP and human lactate dehydrogenase-5 (LDH-5) with high affinities (dissociation constants of 6.2 pM and 235 pM, respectively), applying the systematic evolution of ligands by exponential enrichment (SELEX) method, and by using a modified DNA library containing the following base-appended base modifications: analog adenine derivative at the fifth position of uracil (U(ad)), analog guanine derivative at the fifth position of uracil (U(gu)), and analog adenine derivative at the seventh position of adenine (A(ad)). A potential application of these aptamers as sensor elements includes high-sensitivity target detection in point-of-care testing. MDPI 2020-04-13 /pmc/articles/PMC7215426/ /pubmed/32294882 http://dx.doi.org/10.3390/ijms21082683 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Minagawa, Hirotaka Kataoka, Yuka Fujita, Hiroto Kuwahara, Masayasu Horii, Katsunori Shiratori, Ikuo Waga, Iwao Modified DNA Aptamers for C-Reactive Protein and Lactate Dehydrogenase-5 with Sub-Nanomolar Affinities |
title | Modified DNA Aptamers for C-Reactive Protein and Lactate Dehydrogenase-5 with Sub-Nanomolar Affinities |
title_full | Modified DNA Aptamers for C-Reactive Protein and Lactate Dehydrogenase-5 with Sub-Nanomolar Affinities |
title_fullStr | Modified DNA Aptamers for C-Reactive Protein and Lactate Dehydrogenase-5 with Sub-Nanomolar Affinities |
title_full_unstemmed | Modified DNA Aptamers for C-Reactive Protein and Lactate Dehydrogenase-5 with Sub-Nanomolar Affinities |
title_short | Modified DNA Aptamers for C-Reactive Protein and Lactate Dehydrogenase-5 with Sub-Nanomolar Affinities |
title_sort | modified dna aptamers for c-reactive protein and lactate dehydrogenase-5 with sub-nanomolar affinities |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7215426/ https://www.ncbi.nlm.nih.gov/pubmed/32294882 http://dx.doi.org/10.3390/ijms21082683 |
work_keys_str_mv | AT minagawahirotaka modifieddnaaptamersforcreactiveproteinandlactatedehydrogenase5withsubnanomolaraffinities AT kataokayuka modifieddnaaptamersforcreactiveproteinandlactatedehydrogenase5withsubnanomolaraffinities AT fujitahiroto modifieddnaaptamersforcreactiveproteinandlactatedehydrogenase5withsubnanomolaraffinities AT kuwaharamasayasu modifieddnaaptamersforcreactiveproteinandlactatedehydrogenase5withsubnanomolaraffinities AT horiikatsunori modifieddnaaptamersforcreactiveproteinandlactatedehydrogenase5withsubnanomolaraffinities AT shiratoriikuo modifieddnaaptamersforcreactiveproteinandlactatedehydrogenase5withsubnanomolaraffinities AT wagaiwao modifieddnaaptamersforcreactiveproteinandlactatedehydrogenase5withsubnanomolaraffinities |