Cargando…

Comparative (Within Species) Genomics of the Vitis vinifera L. Terpene Synthase Family to Explore the Impact of Genotypic Variation Using Phased Diploid Genomes

The Vitis vinifera L. terpene synthase (VviTPS) family was comprehensively annotated on the phased diploid genomes of three closely related cultivars: Cabernet Sauvignon, Carménère and Chardonnay. VviTPS gene regions were grouped to chromosomes, with the haplotig assemblies used to identify allelic...

Descripción completa

Detalles Bibliográficos
Autores principales:	Smit, Samuel Jacobus, Vivier, Melané Alethea, Young, Philip Richard
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2020
Materias:	Genetics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7216305/ https://www.ncbi.nlm.nih.gov/pubmed/32431727 http://dx.doi.org/10.3389/fgene.2020.00421

Ejemplares similares

Linking Terpene Synthases to Sesquiterpene Metabolism in Grapevine Flowers
por: Smit, Samuel Jacobus, et al.
Publicado: (2019)

Seeing the Forest through the (Phylogenetic) Trees: Functional Characterisation of Grapevine Terpene Synthase (VviTPS) Paralogues and Orthologues
por: Smit, Samuel J., et al.
Publicado: (2021)

Vv-AMP1, a ripening induced peptide from Vitis vinifera shows strong antifungal activity
por: de Beer, Abré, et al.
Publicado: (2008)

The genes and enzymes of the carotenoid metabolic pathway in Vitis vinifera L.
por: Young, Philip R, et al.
Publicado: (2012)

Functional characterisation of three members of the Vitis vinifera L. carotenoid cleavage dioxygenase gene family
por: Lashbrooke, Justin G, et al.
Publicado: (2013)

Genome-Wide Identification, Characterization, and Transcript Analysis of the TCP Transcription Factors in Vitis vinifera
por: Jiu, Songtao, et al.
Publicado: (2019)

Functional Annotation, Genome Organization and Phylogeny of the Grapevine (Vitis vinifera) Terpene Synthase Gene Family Based on Genome Assembly, FLcDNA Cloning, and Enzyme Assays
por: Martin, Diane M, et al.
Publicado: (2010)

Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication
por: Zhou, Yongfeng, et al.
Publicado: (2017)

Whole-genome sequencing and SNV genotyping of ‘Nebbiolo’ (Vitis vinifera L.) clones
por: Gambino, Giorgio, et al.
Publicado: (2017)

The complete chloroplast genome sequence of Vitis vinifera × Vitis labrusca ‘Shenhua’
por: Zhang, Lipeng, et al.
Publicado: (2021)

The Cytochrome P450 Monooxygenase Inventory of Grapevine (Vitis vinifera L.): Genome-Wide Identification, Evolutionary Characterization and Expression Analysis
por: Jiu, Songtao, et al.
Publicado: (2020)

Multiple variation patterns of terpene synthases in 26 maize genomes
por: Sun, Yang, et al.
Publicado: (2023)

Genomics of Flower Identity in Grapevine (Vitis vinifera L.)
por: Palumbo, Fabio, et al.
Publicado: (2019)

Genome-Wide Analysis of the Sucrose Synthase Gene Family in Grape (Vitis vinifera): Structure, Evolution, and Expression Profiles
por: Zhu, Xudong, et al.
Publicado: (2017)

Annotation, classification, genomic organization and expression of the Vitis vinifera CYPome
por: Ilc, Tina, et al.
Publicado: (2018)

The complete chloroplast genome sequence of Vitis vinifera Muscat Hamburg
por: Guo, Dinghan, et al.
Publicado: (2019)

Genome Size Variation Assessment in Vitis vinifera L. Landraces in Ibiza and Formentera (Balearic Islands)
por: González, Raquel, et al.
Publicado: (2022)

Vitis vinifera genotyping toolbox to highlight diversity and germplasm identification
por: Tympakianakis, Stylianos, et al.
Publicado: (2023)

Genome Wide Transcriptional Profile Analysis of Vitis amurensis and Vitis vinifera in Response to Cold Stress
por: Xin, Haiping, et al.
Publicado: (2013)

Whole genome resequencing and custom genotyping unveil clonal lineages in ‘Malbec’ grapevines (Vitis vinifera L.)
por: Calderón, Luciano, et al.
Publicado: (2021)

‘Nebbiolo’ genome assembly allows surveying the occurrence and functional implications of genomic structural variations in grapevines (Vitis vinifera L.)
por: Maestri, Simone, et al.
Publicado: (2022)

Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera
por: Licausi, Francesco, et al.
Publicado: (2010)

Recent amplification and impact of MITEs on the genome of grapevine (Vitis vinifera L.)
por: Benjak, Andrej, et al.
Publicado: (2009)

Portuguese wild grapevine genome re-sequencing (Vitis vinifera sylvestris)
por: Ramos, Miguel J. N., et al.
Publicado: (2020)

The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding
por: Shi, Xiaoya, et al.
Publicado: (2023)

Identification of genomic sites for CRISPR/Cas9-based genome editing in the Vitis vinifera genome
por: Wang, Yi, et al.
Publicado: (2016)

Phenotypic, Hormonal, and Genomic Variation Among Vitis vinifera Clones With Different Cluster Compactness and Reproductive Performance
por: Grimplet, Jérôme, et al.
Publicado: (2019)

Inbreeding Depression in Genotypically Matched Diploid and Tetraploid Maize
por: Yao, Hong, et al.
Publicado: (2020)

The Potential of HTS Approaches for Accurate Genotyping in Grapevine (Vitis vinifera L.)
por: Kunej, Urban, et al.
Publicado: (2020)

Oxidative Transformation of Dihydroflavonols and Flavan-3-ols by Anthocyanidin Synthase from Vitis vinifera
por: Zhang, Jia-Rong, et al.
Publicado: (2022)

Transcriptome analysis reveals pathogenesis-related gene 1 pathway against salicylic acid treatment in grapevine (Vitis vinifera L)
por: Rahman, Faiz Ur, et al.
Publicado: (2022)

Genome-wide and molecular evolution analysis of the subtilase gene family in Vitis vinifera
por: Cao, Jun, et al.
Publicado: (2014)

Genome and transcriptome analysis of the grapevine (Vitis vinifera L.) WRKY gene family
por: Wang, Min, et al.
Publicado: (2014)

The genomes of 204 Vitis vinifera accessions reveal the origin of European wine grapes
por: Magris, Gabriele, et al.
Publicado: (2021)

Genome-wide association study of berry-related traits in grape [Vitis vinifera L.] based on genotyping-by-sequencing markers
por: Guo, Da-Long, et al.
Publicado: (2019)

Variation in DNA methylation patterns of grapevine somaclones (Vitis vinifera L.)
por: Schellenbaum, Paul, et al.
Publicado: (2008)

Transcriptome variation along bud development in grapevine (Vitis vinifera L.)
por: Díaz-Riquelme, José, et al.
Publicado: (2012)

The Necessity of Diploid Genome Sequencing to Unravel the Genetic Component of Complex Phenotypes
por: Aleman, Fernando
Publicado: (2017)

Genome-Wide Analysis of Terpene Synthase Gene Family in Mentha longifolia and Catalytic Activity Analysis of a Single Terpene Synthase
por: Chen, Zequn, et al.
Publicado: (2021)

Dataset of concentrations of free terpenes at different phenological stages in Vitis vinifera L. Shiraz, Cabernet Sauvignon, Riesling, Chardonnay and Pinot Gris
por: Luo, Jiaqiang, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_pfri7c3kobre1o3pkb0osocfqq