Cargando…

High-resolution profile of transcriptomes reveals a role of alternative splicing for modulating response to nitrogen in maize

BACKGROUND: The fluctuation of nitrogen (N) contents profoundly affects the root growth and architecture in maize by altering the expression of thousands of genes. The differentially expressed genes (DEGs) in response to N have been extensively reported. However, information about the effects of N v...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wang, Yuancong, Xu, Jinyan, Ge, Min, Ning, Lihua, Hu, Mengmei, Zhao, Han
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2020
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7216474/ https://www.ncbi.nlm.nih.gov/pubmed/32393171 http://dx.doi.org/10.1186/s12864-020-6769-8

Ejemplares similares

Cross-Species Root Transcriptional Network Analysis Highlights Conserved Modules in Response to Nitrate between Maize and Sorghum
por: Du, Hongyang, et al.
Publicado: (2020)

The NIN‐like protein 5 (ZmNLP5) transcription factor is involved in modulating the nitrogen response in maize
por: Ge, Min, et al.
Publicado: (2020)

Nitrogen-dependent binding of the transcription factor PBF1 contributes to the balance of protein and carbohydrate storage in maize endosperm
por: Ning, Lihua, et al.
Publicado: (2022)

Transcriptome analysis of alternative splicing events regulated by SRSF10 reveals position-dependent splicing modulation
por: Zhou, Xuexia, et al.
Publicado: (2014)

Rice Transcriptome Analysis Reveals Nitrogen Starvation Modulates Differential Alternative Splicing and Transcript Usage in Various Metabolism-Related Genes
por: Chaudhary, Saurabh, et al.
Publicado: (2021)

Transcriptome sequencing reveals the roles of transcription factors in modulating genotype by nitrogen interaction in maize
por: Chen, Qiuyue, et al.
Publicado: (2015)

The C. elegans embryonic transcriptome with tissue, time, and alternative splicing resolution
por: Warner, Adam D., et al.
Publicado: (2019)

Comparative transcriptomics uncovers alternative splicing changes and signatures of selection from maize improvement
por: Huang, Jun, et al.
Publicado: (2015)

RNA Expression Profile and Alternative Splicing Signatures of Genistein-Treated Breeder Hens Revealed by Hepatic Transcriptomic Analysis
por: Lv, Zengpeng, et al.
Publicado: (2019)

Genome-wide identification, transcriptome analysis and alternative splicing events of Hsf family genes in maize
por: Zhang, Huaning, et al.
Publicado: (2020)

Computer Analysis of Glioma Transcriptome Profiling: Alternative Splicing Events
por: Babenko, Vladimir N., et al.
Publicado: (2017)

A Comprehensive Analysis of Alternative Splicing in Paleopolyploid Maize
por: Mei, Wenbin, et al.
Publicado: (2017)

Transcriptome profiling of mouse brains with qkI-deficient oligodendrocytes reveals major alternative splicing defects including self-splicing
por: Darbelli, Lama, et al.
Publicado: (2017)

Position-dependent alternative splicing activity revealed by global profiling of alternative splicing events regulated by PTB
por: Llorian, Miriam, et al.
Publicado: (2010)

Global analysis of CPSF2-mediated alternative splicing: Integration of global iCLIP and transcriptome profiling data
por: Misra, Ashish, et al.
Publicado: (2015)

Profiles of alternative splicing events in the diagnosis and prognosis of Gastric Cancer
por: Wei, Chunyin, et al.
Publicado: (2021)

Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis
por: Marquez, Yamile, et al.
Publicado: (2012)

High resolution analysis of the human transcriptome: detection of extensive alternative splicing independent of transcriptional activity
por: Zhou, Weiyin, et al.
Publicado: (2009)

Spliced Leader Trapping Reveals Widespread Alternative Splicing Patterns in the Highly Dynamic Transcriptome of Trypanosoma brucei
por: Nilsson, Daniel, et al.
Publicado: (2010)

Transcriptome profiling in Rift Valley fever virus infected cells reveals modified transcriptional and alternative splicing programs
por: Havranek, Katherine E., et al.
Publicado: (2019)

Transcriptome profiling reveals transcriptional and alternative splicing regulation in the early embryonic development of hair follicles in the cashmere goat
por: Zhang, Yanjun, et al.
Publicado: (2019)

New gene models and alternative splicing in the maize pathogen Colletotrichum graminicola revealed by RNA-Seq analysis
por: Schliebner, Ivo, et al.
Publicado: (2014)

Integrative transcriptome sequencing reveals extensive alternative trans-splicing and cis-backsplicing in human cells
por: Chuang, Trees-Juen, et al.
Publicado: (2018)

Pharmacology of Modulators of Alternative Splicing
por: Bates, David O., et al.
Publicado: (2017)

Transcriptomics and Alternative Splicing Analyses Reveal Large Differences between Maize Lines B73 and Mo17 in Response to Aphid Rhopalosiphum padi Infestation
por: Song, Juan, et al.
Publicado: (2017)

Salt Stress Modulates the Landscape of Transcriptome and Alternative Splicing in Date Palm (Phoenix dactylifera L.)
por: Xu, Zhongliang, et al.
Publicado: (2022)

Cauliflower mosaic virus Transcriptome Reveals a Complex Alternative Splicing Pattern
por: Bouton, Clément, et al.
Publicado: (2015)

Transcriptome analysis reveals the complexity of alternative splicing regulation in the fungus Verticillium dahliae
por: Jin, Lirong, et al.
Publicado: (2017)

Whole-Genome Uterine Artery Transcriptome Profiling and Alternative Splicing Analysis in Rat Pregnancy
por: Gopalakrishnan, Kathirvel, et al.
Publicado: (2020)

Global Profiling of Dynamic Alternative Splicing Modulation in Arabidopsis Root upon Ralstonia solanacearum Infection
por: Qin, Ning, et al.
Publicado: (2020)

Transcriptomic and genome-wide association study reveal long noncoding RNAs responding to nitrogen deficiency in maize
por: Ma, Peng, et al.
Publicado: (2021)

Unconstrained mining of transcript data reveals increased alternative splicing complexity in the human transcriptome
por: Mollet, I. G., et al.
Publicado: (2010)

Transcriptome Bioinformatical Analysis of Vertebrate Stages of Schistosoma japonicum Reveals Alternative Splicing Events
por: Wang, Xinye, et al.
Publicado: (2015)

Transcriptomic Analysis Revealed an Emerging Role of Alternative Splicing in Embryonal Tumor with Multilayered Rosettes
por: Hesham, Dina, et al.
Publicado: (2020)

Genome-wide analysis of the soybean root transcriptome reveals the impact of nitrate on alternative splicing
por: Guo, Binhui, et al.
Publicado: (2021)

Full-Length Transcriptome Sequencing Reveals the Impact of Cold Stress on Alternative Splicing in Quinoa
por: Zheng, Ling, et al.
Publicado: (2022)

Comprehensive Transcriptome Analysis Reveals Sex-Specific Alternative Splicing Events in Zebrafish Gonads
por: Lin, Xing, et al.
Publicado: (2022)

Alternative splicing modulation by G-quadruplexes
por: Georgakopoulos-Soares, Ilias, et al.
Publicado: (2022)

Alternative splicing of ZmCCA1 mediates drought response in tropical maize
por: Tian, Lei, et al.
Publicado: (2019)

Profiling of prognostic alternative splicing in melanoma
por: Ma, Fu-Chao, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_003en4hnnnebv8gev0d7at8qhn