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Pooling individual participant data from randomized controlled trials: Exploring potential loss of information
BACKGROUND: Pooling individual participant data to enable pooled analyses is often complicated by diversity in variables across available datasets. Therefore, recoding original variables is often necessary to build a pooled dataset. We aimed to quantify how much information is lost in this process a...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7217432/ https://www.ncbi.nlm.nih.gov/pubmed/32396543 http://dx.doi.org/10.1371/journal.pone.0232970 |
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author | van Wanrooij, Lennard L. Hoevenaar-Blom, Marieke P. Coley, Nicola Ngandu, Tiia Meiller, Yannick Guillemont, Juliette Rosenberg, Anna Beishuizen, Cathrien R. L. Moll van Charante, Eric P. Soininen, Hilkka Brayne, Carol Andrieu, Sandrine Kivipelto, Miia Richard, Edo |
author_facet | van Wanrooij, Lennard L. Hoevenaar-Blom, Marieke P. Coley, Nicola Ngandu, Tiia Meiller, Yannick Guillemont, Juliette Rosenberg, Anna Beishuizen, Cathrien R. L. Moll van Charante, Eric P. Soininen, Hilkka Brayne, Carol Andrieu, Sandrine Kivipelto, Miia Richard, Edo |
author_sort | van Wanrooij, Lennard L. |
collection | PubMed |
description | BACKGROUND: Pooling individual participant data to enable pooled analyses is often complicated by diversity in variables across available datasets. Therefore, recoding original variables is often necessary to build a pooled dataset. We aimed to quantify how much information is lost in this process and to what extent this jeopardizes validity of analyses results. METHODS: Data were derived from a platform that was developed to pool data from three randomized controlled trials on the effect of treatment of cardiovascular risk factors on cognitive decline or dementia. We quantified loss of information using the R-squared of linear regression models with pooled variables as a function of their original variable(s). In case the R-squared was below 0.8, we additionally explored the potential impact of loss of information for future analyses. We did this second step by comparing whether the Beta coefficient of the predictor differed more than 10% when adding original or recoded variables as a confounder in a linear regression model. In a simulation we randomly sampled numbers, recoded those < = 1000 to 0 and those >1000 to 1 and varied the range of the continuous variable, the ratio of recoded zeroes to recoded ones, or both, and again extracted the R-squared from linear models to quantify information loss. RESULTS: The R-squared was below 0.8 for 8 out of 91 recoded variables. In 4 cases this had a substantial impact on the regression models, particularly when a continuous variable was recoded into a discrete variable. Our simulation showed that the least information is lost when the ratio of recoded zeroes to ones is 1:1. CONCLUSIONS: Large, pooled datasets provide great opportunities, justifying the efforts for data harmonization. Still, caution is warranted when using recoded variables which variance is explained limitedly by their original variables as this may jeopardize the validity of study results. |
format | Online Article Text |
id | pubmed-7217432 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-72174322020-05-26 Pooling individual participant data from randomized controlled trials: Exploring potential loss of information van Wanrooij, Lennard L. Hoevenaar-Blom, Marieke P. Coley, Nicola Ngandu, Tiia Meiller, Yannick Guillemont, Juliette Rosenberg, Anna Beishuizen, Cathrien R. L. Moll van Charante, Eric P. Soininen, Hilkka Brayne, Carol Andrieu, Sandrine Kivipelto, Miia Richard, Edo PLoS One Research Article BACKGROUND: Pooling individual participant data to enable pooled analyses is often complicated by diversity in variables across available datasets. Therefore, recoding original variables is often necessary to build a pooled dataset. We aimed to quantify how much information is lost in this process and to what extent this jeopardizes validity of analyses results. METHODS: Data were derived from a platform that was developed to pool data from three randomized controlled trials on the effect of treatment of cardiovascular risk factors on cognitive decline or dementia. We quantified loss of information using the R-squared of linear regression models with pooled variables as a function of their original variable(s). In case the R-squared was below 0.8, we additionally explored the potential impact of loss of information for future analyses. We did this second step by comparing whether the Beta coefficient of the predictor differed more than 10% when adding original or recoded variables as a confounder in a linear regression model. In a simulation we randomly sampled numbers, recoded those < = 1000 to 0 and those >1000 to 1 and varied the range of the continuous variable, the ratio of recoded zeroes to recoded ones, or both, and again extracted the R-squared from linear models to quantify information loss. RESULTS: The R-squared was below 0.8 for 8 out of 91 recoded variables. In 4 cases this had a substantial impact on the regression models, particularly when a continuous variable was recoded into a discrete variable. Our simulation showed that the least information is lost when the ratio of recoded zeroes to ones is 1:1. CONCLUSIONS: Large, pooled datasets provide great opportunities, justifying the efforts for data harmonization. Still, caution is warranted when using recoded variables which variance is explained limitedly by their original variables as this may jeopardize the validity of study results. Public Library of Science 2020-05-12 /pmc/articles/PMC7217432/ /pubmed/32396543 http://dx.doi.org/10.1371/journal.pone.0232970 Text en © 2020 van Wanrooij et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article van Wanrooij, Lennard L. Hoevenaar-Blom, Marieke P. Coley, Nicola Ngandu, Tiia Meiller, Yannick Guillemont, Juliette Rosenberg, Anna Beishuizen, Cathrien R. L. Moll van Charante, Eric P. Soininen, Hilkka Brayne, Carol Andrieu, Sandrine Kivipelto, Miia Richard, Edo Pooling individual participant data from randomized controlled trials: Exploring potential loss of information |
title | Pooling individual participant data from randomized controlled trials: Exploring potential loss of information |
title_full | Pooling individual participant data from randomized controlled trials: Exploring potential loss of information |
title_fullStr | Pooling individual participant data from randomized controlled trials: Exploring potential loss of information |
title_full_unstemmed | Pooling individual participant data from randomized controlled trials: Exploring potential loss of information |
title_short | Pooling individual participant data from randomized controlled trials: Exploring potential loss of information |
title_sort | pooling individual participant data from randomized controlled trials: exploring potential loss of information |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7217432/ https://www.ncbi.nlm.nih.gov/pubmed/32396543 http://dx.doi.org/10.1371/journal.pone.0232970 |
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