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Forecasting the monthly incidence rate of brucellosis in west of Iran using time series and data mining from 2010 to 2019
BACKGROUND: The identification of statistical models for the accurate forecast and timely determination of the outbreak of infectious diseases is very important for the healthcare system. Thus, this study was conducted to assess and compare the performance of four machine-learning methods in modelin...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7217463/ https://www.ncbi.nlm.nih.gov/pubmed/32396582 http://dx.doi.org/10.1371/journal.pone.0232910 |
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author | Bagheri, Hadi Tapak, Leili Karami, Manoochehr Hosseinkhani, Zahra Najari, Hamidreza Karimi, Safdar Cheraghi, Zahra |
author_facet | Bagheri, Hadi Tapak, Leili Karami, Manoochehr Hosseinkhani, Zahra Najari, Hamidreza Karimi, Safdar Cheraghi, Zahra |
author_sort | Bagheri, Hadi |
collection | PubMed |
description | BACKGROUND: The identification of statistical models for the accurate forecast and timely determination of the outbreak of infectious diseases is very important for the healthcare system. Thus, this study was conducted to assess and compare the performance of four machine-learning methods in modeling and forecasting brucellosis time series data based on climatic parameters. METHODS: In this cohort study, human brucellosis cases and climatic parameters were analyzed on a monthly basis for the Qazvin province–located in northwestern Iran- over a period of 9 years (2010–2018). The data were classified into two subsets of education (80%) and testing (20%). Artificial neural network methods (radial basis function and multilayer perceptron), support vector machine and random forest were fitted to each set. Performance analysis of the models were done using the Root Mean Square Error (RMSE), Mean Absolute Error (MAE), Mean Absolute Root Error (MARE), and R(2) criteria. RESULTS: The incidence rate of the brucellosis in Qazvin province was 27.43 per 100,000 during 2010–2019. Based on our results, the values of the RMSE (0.22), MAE (0.175), MARE (0.007) criteria were smaller for the multilayer perceptron neural network than their values in the other three models. Moreover, the R(2) (0.99) value was bigger in this model. Therefore, the multilayer perceptron neural network exhibited better performance in forecasting the studied data. The average wind speed and mean temperature were the most effective climatic parameters in the incidence of this disease. CONCLUSIONS: The multilayer perceptron neural network can be used as an effective method in detecting the behavioral trend of brucellosis over time. Nevertheless, further studies focusing on the application and comparison of these methods are needed to detect the most appropriate forecast method for this disease. |
format | Online Article Text |
id | pubmed-7217463 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-72174632020-05-29 Forecasting the monthly incidence rate of brucellosis in west of Iran using time series and data mining from 2010 to 2019 Bagheri, Hadi Tapak, Leili Karami, Manoochehr Hosseinkhani, Zahra Najari, Hamidreza Karimi, Safdar Cheraghi, Zahra PLoS One Research Article BACKGROUND: The identification of statistical models for the accurate forecast and timely determination of the outbreak of infectious diseases is very important for the healthcare system. Thus, this study was conducted to assess and compare the performance of four machine-learning methods in modeling and forecasting brucellosis time series data based on climatic parameters. METHODS: In this cohort study, human brucellosis cases and climatic parameters were analyzed on a monthly basis for the Qazvin province–located in northwestern Iran- over a period of 9 years (2010–2018). The data were classified into two subsets of education (80%) and testing (20%). Artificial neural network methods (radial basis function and multilayer perceptron), support vector machine and random forest were fitted to each set. Performance analysis of the models were done using the Root Mean Square Error (RMSE), Mean Absolute Error (MAE), Mean Absolute Root Error (MARE), and R(2) criteria. RESULTS: The incidence rate of the brucellosis in Qazvin province was 27.43 per 100,000 during 2010–2019. Based on our results, the values of the RMSE (0.22), MAE (0.175), MARE (0.007) criteria were smaller for the multilayer perceptron neural network than their values in the other three models. Moreover, the R(2) (0.99) value was bigger in this model. Therefore, the multilayer perceptron neural network exhibited better performance in forecasting the studied data. The average wind speed and mean temperature were the most effective climatic parameters in the incidence of this disease. CONCLUSIONS: The multilayer perceptron neural network can be used as an effective method in detecting the behavioral trend of brucellosis over time. Nevertheless, further studies focusing on the application and comparison of these methods are needed to detect the most appropriate forecast method for this disease. Public Library of Science 2020-05-12 /pmc/articles/PMC7217463/ /pubmed/32396582 http://dx.doi.org/10.1371/journal.pone.0232910 Text en © 2020 Bagheri et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Bagheri, Hadi Tapak, Leili Karami, Manoochehr Hosseinkhani, Zahra Najari, Hamidreza Karimi, Safdar Cheraghi, Zahra Forecasting the monthly incidence rate of brucellosis in west of Iran using time series and data mining from 2010 to 2019 |
title | Forecasting the monthly incidence rate of brucellosis in west of Iran using time series and data mining from 2010 to 2019 |
title_full | Forecasting the monthly incidence rate of brucellosis in west of Iran using time series and data mining from 2010 to 2019 |
title_fullStr | Forecasting the monthly incidence rate of brucellosis in west of Iran using time series and data mining from 2010 to 2019 |
title_full_unstemmed | Forecasting the monthly incidence rate of brucellosis in west of Iran using time series and data mining from 2010 to 2019 |
title_short | Forecasting the monthly incidence rate of brucellosis in west of Iran using time series and data mining from 2010 to 2019 |
title_sort | forecasting the monthly incidence rate of brucellosis in west of iran using time series and data mining from 2010 to 2019 |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7217463/ https://www.ncbi.nlm.nih.gov/pubmed/32396582 http://dx.doi.org/10.1371/journal.pone.0232910 |
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