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Report on computational assessment of Tumor Infiltrating Lymphocytes from the International Immuno-Oncology Biomarker Working Group

Assessment of tumor-infiltrating lymphocytes (TILs) is increasingly recognized as an integral part of the prognostic workflow in triple-negative (TNBC) and HER2-positive breast cancer, as well as many other solid tumors. This recognition has come about thanks to standardized visual reporting guideli...

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Autores principales: Amgad, Mohamed, Stovgaard, Elisabeth Specht, Balslev, Eva, Thagaard, Jeppe, Chen, Weijie, Dudgeon, Sarah, Sharma, Ashish, Kerner, Jennifer K., Denkert, Carsten, Yuan, Yinyin, AbdulJabbar, Khalid, Wienert, Stephan, Savas, Peter, Voorwerk, Leonie, Beck, Andrew H., Madabhushi, Anant, Hartman, Johan, Sebastian, Manu M., Horlings, Hugo M., Hudeček, Jan, Ciompi, Francesco, Moore, David A., Singh, Rajendra, Roblin, Elvire, Balancin, Marcelo Luiz, Mathieu, Marie-Christine, Lennerz, Jochen K., Kirtani, Pawan, Chen, I-Chun, Braybrooke, Jeremy P., Pruneri, Giancarlo, Demaria, Sandra, Adams, Sylvia, Schnitt, Stuart J., Lakhani, Sunil R., Rojo, Federico, Comerma, Laura, Badve, Sunil S., Khojasteh, Mehrnoush, Symmans, W. Fraser, Sotiriou, Christos, Gonzalez-Ericsson, Paula, Pogue-Geile, Katherine L., Kim, Rim S., Rimm, David L., Viale, Giuseppe, Hewitt, Stephen M., Bartlett, John M. S., Penault-Llorca, Frédérique, Goel, Shom, Lien, Huang-Chun, Loibl, Sibylle, Kos, Zuzana, Loi, Sherene, Hanna, Matthew G., Michiels, Stefan, Kok, Marleen, Nielsen, Torsten O., Lazar, Alexander J., Bago-Horvath, Zsuzsanna, Kooreman, Loes F. S., van der Laak, Jeroen A. W. M., Saltz, Joel, Gallas, Brandon D., Kurkure, Uday, Barnes, Michael, Salgado, Roberto, Cooper, Lee A. D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7217824/
https://www.ncbi.nlm.nih.gov/pubmed/32411818
http://dx.doi.org/10.1038/s41523-020-0154-2
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author Amgad, Mohamed
Stovgaard, Elisabeth Specht
Balslev, Eva
Thagaard, Jeppe
Chen, Weijie
Dudgeon, Sarah
Sharma, Ashish
Kerner, Jennifer K.
Denkert, Carsten
Yuan, Yinyin
AbdulJabbar, Khalid
Wienert, Stephan
Savas, Peter
Voorwerk, Leonie
Beck, Andrew H.
Madabhushi, Anant
Hartman, Johan
Sebastian, Manu M.
Horlings, Hugo M.
Hudeček, Jan
Ciompi, Francesco
Moore, David A.
Singh, Rajendra
Roblin, Elvire
Balancin, Marcelo Luiz
Mathieu, Marie-Christine
Lennerz, Jochen K.
Kirtani, Pawan
Chen, I-Chun
Braybrooke, Jeremy P.
Pruneri, Giancarlo
Demaria, Sandra
Adams, Sylvia
Schnitt, Stuart J.
Lakhani, Sunil R.
Rojo, Federico
Comerma, Laura
Badve, Sunil S.
Khojasteh, Mehrnoush
Symmans, W. Fraser
Sotiriou, Christos
Gonzalez-Ericsson, Paula
Pogue-Geile, Katherine L.
Kim, Rim S.
Rimm, David L.
Viale, Giuseppe
Hewitt, Stephen M.
Bartlett, John M. S.
Penault-Llorca, Frédérique
Goel, Shom
Lien, Huang-Chun
Loibl, Sibylle
Kos, Zuzana
Loi, Sherene
Hanna, Matthew G.
Michiels, Stefan
Kok, Marleen
Nielsen, Torsten O.
Lazar, Alexander J.
Bago-Horvath, Zsuzsanna
Kooreman, Loes F. S.
van der Laak, Jeroen A. W. M.
Saltz, Joel
Gallas, Brandon D.
Kurkure, Uday
Barnes, Michael
Salgado, Roberto
Cooper, Lee A. D.
author_facet Amgad, Mohamed
Stovgaard, Elisabeth Specht
Balslev, Eva
Thagaard, Jeppe
Chen, Weijie
Dudgeon, Sarah
Sharma, Ashish
Kerner, Jennifer K.
Denkert, Carsten
Yuan, Yinyin
AbdulJabbar, Khalid
Wienert, Stephan
Savas, Peter
Voorwerk, Leonie
Beck, Andrew H.
Madabhushi, Anant
Hartman, Johan
Sebastian, Manu M.
Horlings, Hugo M.
Hudeček, Jan
Ciompi, Francesco
Moore, David A.
Singh, Rajendra
Roblin, Elvire
Balancin, Marcelo Luiz
Mathieu, Marie-Christine
Lennerz, Jochen K.
Kirtani, Pawan
Chen, I-Chun
Braybrooke, Jeremy P.
Pruneri, Giancarlo
Demaria, Sandra
Adams, Sylvia
Schnitt, Stuart J.
Lakhani, Sunil R.
Rojo, Federico
Comerma, Laura
Badve, Sunil S.
Khojasteh, Mehrnoush
Symmans, W. Fraser
Sotiriou, Christos
Gonzalez-Ericsson, Paula
Pogue-Geile, Katherine L.
Kim, Rim S.
Rimm, David L.
Viale, Giuseppe
Hewitt, Stephen M.
Bartlett, John M. S.
Penault-Llorca, Frédérique
Goel, Shom
Lien, Huang-Chun
Loibl, Sibylle
Kos, Zuzana
Loi, Sherene
Hanna, Matthew G.
Michiels, Stefan
Kok, Marleen
Nielsen, Torsten O.
Lazar, Alexander J.
Bago-Horvath, Zsuzsanna
Kooreman, Loes F. S.
van der Laak, Jeroen A. W. M.
Saltz, Joel
Gallas, Brandon D.
Kurkure, Uday
Barnes, Michael
Salgado, Roberto
Cooper, Lee A. D.
author_sort Amgad, Mohamed
collection PubMed
description Assessment of tumor-infiltrating lymphocytes (TILs) is increasingly recognized as an integral part of the prognostic workflow in triple-negative (TNBC) and HER2-positive breast cancer, as well as many other solid tumors. This recognition has come about thanks to standardized visual reporting guidelines, which helped to reduce inter-reader variability. Now, there are ripe opportunities to employ computational methods that extract spatio-morphologic predictive features, enabling computer-aided diagnostics. We detail the benefits of computational TILs assessment, the readiness of TILs scoring for computational assessment, and outline considerations for overcoming key barriers to clinical translation in this arena. Specifically, we discuss: 1. ensuring computational workflows closely capture visual guidelines and standards; 2. challenges and thoughts standards for assessment of algorithms including training, preanalytical, analytical, and clinical validation; 3. perspectives on how to realize the potential of machine learning models and to overcome the perceptual and practical limits of visual scoring.
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spelling pubmed-72178242020-05-14 Report on computational assessment of Tumor Infiltrating Lymphocytes from the International Immuno-Oncology Biomarker Working Group Amgad, Mohamed Stovgaard, Elisabeth Specht Balslev, Eva Thagaard, Jeppe Chen, Weijie Dudgeon, Sarah Sharma, Ashish Kerner, Jennifer K. Denkert, Carsten Yuan, Yinyin AbdulJabbar, Khalid Wienert, Stephan Savas, Peter Voorwerk, Leonie Beck, Andrew H. Madabhushi, Anant Hartman, Johan Sebastian, Manu M. Horlings, Hugo M. Hudeček, Jan Ciompi, Francesco Moore, David A. Singh, Rajendra Roblin, Elvire Balancin, Marcelo Luiz Mathieu, Marie-Christine Lennerz, Jochen K. Kirtani, Pawan Chen, I-Chun Braybrooke, Jeremy P. Pruneri, Giancarlo Demaria, Sandra Adams, Sylvia Schnitt, Stuart J. Lakhani, Sunil R. Rojo, Federico Comerma, Laura Badve, Sunil S. Khojasteh, Mehrnoush Symmans, W. Fraser Sotiriou, Christos Gonzalez-Ericsson, Paula Pogue-Geile, Katherine L. Kim, Rim S. Rimm, David L. Viale, Giuseppe Hewitt, Stephen M. Bartlett, John M. S. Penault-Llorca, Frédérique Goel, Shom Lien, Huang-Chun Loibl, Sibylle Kos, Zuzana Loi, Sherene Hanna, Matthew G. Michiels, Stefan Kok, Marleen Nielsen, Torsten O. Lazar, Alexander J. Bago-Horvath, Zsuzsanna Kooreman, Loes F. S. van der Laak, Jeroen A. W. M. Saltz, Joel Gallas, Brandon D. Kurkure, Uday Barnes, Michael Salgado, Roberto Cooper, Lee A. D. NPJ Breast Cancer Review Article Assessment of tumor-infiltrating lymphocytes (TILs) is increasingly recognized as an integral part of the prognostic workflow in triple-negative (TNBC) and HER2-positive breast cancer, as well as many other solid tumors. This recognition has come about thanks to standardized visual reporting guidelines, which helped to reduce inter-reader variability. Now, there are ripe opportunities to employ computational methods that extract spatio-morphologic predictive features, enabling computer-aided diagnostics. We detail the benefits of computational TILs assessment, the readiness of TILs scoring for computational assessment, and outline considerations for overcoming key barriers to clinical translation in this arena. Specifically, we discuss: 1. ensuring computational workflows closely capture visual guidelines and standards; 2. challenges and thoughts standards for assessment of algorithms including training, preanalytical, analytical, and clinical validation; 3. perspectives on how to realize the potential of machine learning models and to overcome the perceptual and practical limits of visual scoring. Nature Publishing Group UK 2020-05-12 /pmc/articles/PMC7217824/ /pubmed/32411818 http://dx.doi.org/10.1038/s41523-020-0154-2 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Review Article
Amgad, Mohamed
Stovgaard, Elisabeth Specht
Balslev, Eva
Thagaard, Jeppe
Chen, Weijie
Dudgeon, Sarah
Sharma, Ashish
Kerner, Jennifer K.
Denkert, Carsten
Yuan, Yinyin
AbdulJabbar, Khalid
Wienert, Stephan
Savas, Peter
Voorwerk, Leonie
Beck, Andrew H.
Madabhushi, Anant
Hartman, Johan
Sebastian, Manu M.
Horlings, Hugo M.
Hudeček, Jan
Ciompi, Francesco
Moore, David A.
Singh, Rajendra
Roblin, Elvire
Balancin, Marcelo Luiz
Mathieu, Marie-Christine
Lennerz, Jochen K.
Kirtani, Pawan
Chen, I-Chun
Braybrooke, Jeremy P.
Pruneri, Giancarlo
Demaria, Sandra
Adams, Sylvia
Schnitt, Stuart J.
Lakhani, Sunil R.
Rojo, Federico
Comerma, Laura
Badve, Sunil S.
Khojasteh, Mehrnoush
Symmans, W. Fraser
Sotiriou, Christos
Gonzalez-Ericsson, Paula
Pogue-Geile, Katherine L.
Kim, Rim S.
Rimm, David L.
Viale, Giuseppe
Hewitt, Stephen M.
Bartlett, John M. S.
Penault-Llorca, Frédérique
Goel, Shom
Lien, Huang-Chun
Loibl, Sibylle
Kos, Zuzana
Loi, Sherene
Hanna, Matthew G.
Michiels, Stefan
Kok, Marleen
Nielsen, Torsten O.
Lazar, Alexander J.
Bago-Horvath, Zsuzsanna
Kooreman, Loes F. S.
van der Laak, Jeroen A. W. M.
Saltz, Joel
Gallas, Brandon D.
Kurkure, Uday
Barnes, Michael
Salgado, Roberto
Cooper, Lee A. D.
Report on computational assessment of Tumor Infiltrating Lymphocytes from the International Immuno-Oncology Biomarker Working Group
title Report on computational assessment of Tumor Infiltrating Lymphocytes from the International Immuno-Oncology Biomarker Working Group
title_full Report on computational assessment of Tumor Infiltrating Lymphocytes from the International Immuno-Oncology Biomarker Working Group
title_fullStr Report on computational assessment of Tumor Infiltrating Lymphocytes from the International Immuno-Oncology Biomarker Working Group
title_full_unstemmed Report on computational assessment of Tumor Infiltrating Lymphocytes from the International Immuno-Oncology Biomarker Working Group
title_short Report on computational assessment of Tumor Infiltrating Lymphocytes from the International Immuno-Oncology Biomarker Working Group
title_sort report on computational assessment of tumor infiltrating lymphocytes from the international immuno-oncology biomarker working group
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7217824/
https://www.ncbi.nlm.nih.gov/pubmed/32411818
http://dx.doi.org/10.1038/s41523-020-0154-2
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