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Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features

OBJECTIVE: To evaluate the human epidermal growth factor receptor 2 (HER2) status in patients with breast cancer using multidetector computed tomography (MDCT)-based handcrafted and deep radiomics features. METHODS: This retrospective study enrolled 339 female patients (primary cohort, n=177; valida...

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Autores principales: Yang, Xiaojun, Wu, Lei, Zhao, Ke, Ye, Weitao, Liu, Weixiao, Wang, Yingyi, Li, Jiao, Li, Hanxiao, Huang, Xiaomei, Zhang, Wen, Huang, Yanqi, Chen, Xin, Yao, Su, Liu, Zaiyi, Liang, Changhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AME Publishing Company 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7219093/
https://www.ncbi.nlm.nih.gov/pubmed/32410795
http://dx.doi.org/10.21147/j.issn.1000-9604.2020.02.05
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author Yang, Xiaojun
Wu, Lei
Zhao, Ke
Ye, Weitao
Liu, Weixiao
Wang, Yingyi
Li, Jiao
Li, Hanxiao
Huang, Xiaomei
Zhang, Wen
Huang, Yanqi
Chen, Xin
Yao, Su
Liu, Zaiyi
Liang, Changhong
author_facet Yang, Xiaojun
Wu, Lei
Zhao, Ke
Ye, Weitao
Liu, Weixiao
Wang, Yingyi
Li, Jiao
Li, Hanxiao
Huang, Xiaomei
Zhang, Wen
Huang, Yanqi
Chen, Xin
Yao, Su
Liu, Zaiyi
Liang, Changhong
author_sort Yang, Xiaojun
collection PubMed
description OBJECTIVE: To evaluate the human epidermal growth factor receptor 2 (HER2) status in patients with breast cancer using multidetector computed tomography (MDCT)-based handcrafted and deep radiomics features. METHODS: This retrospective study enrolled 339 female patients (primary cohort, n=177; validation cohort, n=162) with pathologically confirmed invasive breast cancer. Handcrafted and deep radiomics features were extracted from the MDCT images during the arterial phase. After the feature selection procedures, handcrafted and deep radiomics signatures and the combined model were built using multivariate logistic regression analysis. Performance was assessed by measures of discrimination, calibration, and clinical usefulness in the primary cohort and validated in the validation cohort. RESULTS: The handcrafted radiomics signature had a discriminative ability with a C-index of 0.739 [95% confidence interval (95% CI): 0.661−0.818] in the primary cohort and 0.695 (95% CI: 0.609−0.781) in the validation cohort. The deep radiomics signature also had a discriminative ability with a C-index of 0.760 (95% CI: 0.690−0.831) in the primary cohort and 0.777 (95% CI: 0.696−0.857) in the validation cohort. The combined model, which incorporated both the handcrafted and deep radiomics signatures, showed good discriminative ability with a C-index of 0.829 (95% CI: 0.767−0.890) in the primary cohort and 0.809 (95% CI: 0.740−0.879) in the validation cohort. CONCLUSIONS: Handcrafted and deep radiomics features from MDCT images were associated with HER2 status in patients with breast cancer. Thus, these features could provide complementary aid for the radiological evaluation of HER2 status in breast cancer.
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spelling pubmed-72190932020-05-14 Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features Yang, Xiaojun Wu, Lei Zhao, Ke Ye, Weitao Liu, Weixiao Wang, Yingyi Li, Jiao Li, Hanxiao Huang, Xiaomei Zhang, Wen Huang, Yanqi Chen, Xin Yao, Su Liu, Zaiyi Liang, Changhong Chin J Cancer Res Original Article OBJECTIVE: To evaluate the human epidermal growth factor receptor 2 (HER2) status in patients with breast cancer using multidetector computed tomography (MDCT)-based handcrafted and deep radiomics features. METHODS: This retrospective study enrolled 339 female patients (primary cohort, n=177; validation cohort, n=162) with pathologically confirmed invasive breast cancer. Handcrafted and deep radiomics features were extracted from the MDCT images during the arterial phase. After the feature selection procedures, handcrafted and deep radiomics signatures and the combined model were built using multivariate logistic regression analysis. Performance was assessed by measures of discrimination, calibration, and clinical usefulness in the primary cohort and validated in the validation cohort. RESULTS: The handcrafted radiomics signature had a discriminative ability with a C-index of 0.739 [95% confidence interval (95% CI): 0.661−0.818] in the primary cohort and 0.695 (95% CI: 0.609−0.781) in the validation cohort. The deep radiomics signature also had a discriminative ability with a C-index of 0.760 (95% CI: 0.690−0.831) in the primary cohort and 0.777 (95% CI: 0.696−0.857) in the validation cohort. The combined model, which incorporated both the handcrafted and deep radiomics signatures, showed good discriminative ability with a C-index of 0.829 (95% CI: 0.767−0.890) in the primary cohort and 0.809 (95% CI: 0.740−0.879) in the validation cohort. CONCLUSIONS: Handcrafted and deep radiomics features from MDCT images were associated with HER2 status in patients with breast cancer. Thus, these features could provide complementary aid for the radiological evaluation of HER2 status in breast cancer. AME Publishing Company 2020-04 /pmc/articles/PMC7219093/ /pubmed/32410795 http://dx.doi.org/10.21147/j.issn.1000-9604.2020.02.05 Text en Copyright © 2020 Chinese Journal of Cancer Research. All rights reserved. http://creativecommons.org/licenses/by-nc-sa/4.0/ This work is licensed under a Creative Commons Attribution-Non Commercial-Share Alike 4.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/
spellingShingle Original Article
Yang, Xiaojun
Wu, Lei
Zhao, Ke
Ye, Weitao
Liu, Weixiao
Wang, Yingyi
Li, Jiao
Li, Hanxiao
Huang, Xiaomei
Zhang, Wen
Huang, Yanqi
Chen, Xin
Yao, Su
Liu, Zaiyi
Liang, Changhong
Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features
title Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features
title_full Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features
title_fullStr Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features
title_full_unstemmed Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features
title_short Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features
title_sort evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7219093/
https://www.ncbi.nlm.nih.gov/pubmed/32410795
http://dx.doi.org/10.21147/j.issn.1000-9604.2020.02.05
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