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Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features
OBJECTIVE: To evaluate the human epidermal growth factor receptor 2 (HER2) status in patients with breast cancer using multidetector computed tomography (MDCT)-based handcrafted and deep radiomics features. METHODS: This retrospective study enrolled 339 female patients (primary cohort, n=177; valida...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7219093/ https://www.ncbi.nlm.nih.gov/pubmed/32410795 http://dx.doi.org/10.21147/j.issn.1000-9604.2020.02.05 |
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author | Yang, Xiaojun Wu, Lei Zhao, Ke Ye, Weitao Liu, Weixiao Wang, Yingyi Li, Jiao Li, Hanxiao Huang, Xiaomei Zhang, Wen Huang, Yanqi Chen, Xin Yao, Su Liu, Zaiyi Liang, Changhong |
author_facet | Yang, Xiaojun Wu, Lei Zhao, Ke Ye, Weitao Liu, Weixiao Wang, Yingyi Li, Jiao Li, Hanxiao Huang, Xiaomei Zhang, Wen Huang, Yanqi Chen, Xin Yao, Su Liu, Zaiyi Liang, Changhong |
author_sort | Yang, Xiaojun |
collection | PubMed |
description | OBJECTIVE: To evaluate the human epidermal growth factor receptor 2 (HER2) status in patients with breast cancer using multidetector computed tomography (MDCT)-based handcrafted and deep radiomics features. METHODS: This retrospective study enrolled 339 female patients (primary cohort, n=177; validation cohort, n=162) with pathologically confirmed invasive breast cancer. Handcrafted and deep radiomics features were extracted from the MDCT images during the arterial phase. After the feature selection procedures, handcrafted and deep radiomics signatures and the combined model were built using multivariate logistic regression analysis. Performance was assessed by measures of discrimination, calibration, and clinical usefulness in the primary cohort and validated in the validation cohort. RESULTS: The handcrafted radiomics signature had a discriminative ability with a C-index of 0.739 [95% confidence interval (95% CI): 0.661−0.818] in the primary cohort and 0.695 (95% CI: 0.609−0.781) in the validation cohort. The deep radiomics signature also had a discriminative ability with a C-index of 0.760 (95% CI: 0.690−0.831) in the primary cohort and 0.777 (95% CI: 0.696−0.857) in the validation cohort. The combined model, which incorporated both the handcrafted and deep radiomics signatures, showed good discriminative ability with a C-index of 0.829 (95% CI: 0.767−0.890) in the primary cohort and 0.809 (95% CI: 0.740−0.879) in the validation cohort. CONCLUSIONS: Handcrafted and deep radiomics features from MDCT images were associated with HER2 status in patients with breast cancer. Thus, these features could provide complementary aid for the radiological evaluation of HER2 status in breast cancer. |
format | Online Article Text |
id | pubmed-7219093 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-72190932020-05-14 Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features Yang, Xiaojun Wu, Lei Zhao, Ke Ye, Weitao Liu, Weixiao Wang, Yingyi Li, Jiao Li, Hanxiao Huang, Xiaomei Zhang, Wen Huang, Yanqi Chen, Xin Yao, Su Liu, Zaiyi Liang, Changhong Chin J Cancer Res Original Article OBJECTIVE: To evaluate the human epidermal growth factor receptor 2 (HER2) status in patients with breast cancer using multidetector computed tomography (MDCT)-based handcrafted and deep radiomics features. METHODS: This retrospective study enrolled 339 female patients (primary cohort, n=177; validation cohort, n=162) with pathologically confirmed invasive breast cancer. Handcrafted and deep radiomics features were extracted from the MDCT images during the arterial phase. After the feature selection procedures, handcrafted and deep radiomics signatures and the combined model were built using multivariate logistic regression analysis. Performance was assessed by measures of discrimination, calibration, and clinical usefulness in the primary cohort and validated in the validation cohort. RESULTS: The handcrafted radiomics signature had a discriminative ability with a C-index of 0.739 [95% confidence interval (95% CI): 0.661−0.818] in the primary cohort and 0.695 (95% CI: 0.609−0.781) in the validation cohort. The deep radiomics signature also had a discriminative ability with a C-index of 0.760 (95% CI: 0.690−0.831) in the primary cohort and 0.777 (95% CI: 0.696−0.857) in the validation cohort. The combined model, which incorporated both the handcrafted and deep radiomics signatures, showed good discriminative ability with a C-index of 0.829 (95% CI: 0.767−0.890) in the primary cohort and 0.809 (95% CI: 0.740−0.879) in the validation cohort. CONCLUSIONS: Handcrafted and deep radiomics features from MDCT images were associated with HER2 status in patients with breast cancer. Thus, these features could provide complementary aid for the radiological evaluation of HER2 status in breast cancer. AME Publishing Company 2020-04 /pmc/articles/PMC7219093/ /pubmed/32410795 http://dx.doi.org/10.21147/j.issn.1000-9604.2020.02.05 Text en Copyright © 2020 Chinese Journal of Cancer Research. All rights reserved. http://creativecommons.org/licenses/by-nc-sa/4.0/ This work is licensed under a Creative Commons Attribution-Non Commercial-Share Alike 4.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/ |
spellingShingle | Original Article Yang, Xiaojun Wu, Lei Zhao, Ke Ye, Weitao Liu, Weixiao Wang, Yingyi Li, Jiao Li, Hanxiao Huang, Xiaomei Zhang, Wen Huang, Yanqi Chen, Xin Yao, Su Liu, Zaiyi Liang, Changhong Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features |
title | Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features |
title_full | Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features |
title_fullStr | Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features |
title_full_unstemmed | Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features |
title_short | Evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features |
title_sort | evaluation of human epidermal growth factor receptor 2 status of breast cancer using preoperative multidetector computed tomography with deep learning and handcrafted radiomics features |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7219093/ https://www.ncbi.nlm.nih.gov/pubmed/32410795 http://dx.doi.org/10.21147/j.issn.1000-9604.2020.02.05 |
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