Cargando…

Cadaveric blood cards: Assessing DNA quality and quantity and the utility of STRs for the individual estimation of trihybrid ancestry and admixture proportions

As part a body donation program, blood samples were collected and stored on untreated (non-FTA) blood cards. The blood cards were evaluated in terms of DNA preservation and STR typing success with resulting profiles assessed with special consideration given to profile matching for positive identific...

Descripción completa

Detalles Bibliográficos
Autores principales: West, Frankie L., Algee-Hewitt, Bridget F.B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7219121/
https://www.ncbi.nlm.nih.gov/pubmed/32412010
http://dx.doi.org/10.1016/j.fsisyn.2020.03.002
_version_ 1783532932588109824
author West, Frankie L.
Algee-Hewitt, Bridget F.B.
author_facet West, Frankie L.
Algee-Hewitt, Bridget F.B.
author_sort West, Frankie L.
collection PubMed
description As part a body donation program, blood samples were collected and stored on untreated (non-FTA) blood cards. The blood cards were evaluated in terms of DNA preservation and STR typing success with resulting profiles assessed with special consideration given to profile matching for positive identification and biogeographic ancestry estimation. While STR profiles were successfully generated for all samples, results indicate that the time interval between date of death and sample collection have an impact on DNA quantity and quality. There is a statistically significant decrease in relative fluorescent unit (RFU) values with increasing time interval between date of death and sample collection, indicating degradation in the blood card samples related to the post-mortem interval prior to sample collection. The STR profiles were used to estimate ancestry and admixture using the program STRUCTURE, demonstrating utility of these markers beyond individual identification purposes, with caveats for application based on population history.
format Online
Article
Text
id pubmed-7219121
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-72191212020-05-14 Cadaveric blood cards: Assessing DNA quality and quantity and the utility of STRs for the individual estimation of trihybrid ancestry and admixture proportions West, Frankie L. Algee-Hewitt, Bridget F.B. Forensic Sci Int Synerg Interdisciplinary Forensics As part a body donation program, blood samples were collected and stored on untreated (non-FTA) blood cards. The blood cards were evaluated in terms of DNA preservation and STR typing success with resulting profiles assessed with special consideration given to profile matching for positive identification and biogeographic ancestry estimation. While STR profiles were successfully generated for all samples, results indicate that the time interval between date of death and sample collection have an impact on DNA quantity and quality. There is a statistically significant decrease in relative fluorescent unit (RFU) values with increasing time interval between date of death and sample collection, indicating degradation in the blood card samples related to the post-mortem interval prior to sample collection. The STR profiles were used to estimate ancestry and admixture using the program STRUCTURE, demonstrating utility of these markers beyond individual identification purposes, with caveats for application based on population history. Elsevier 2020-03-07 /pmc/articles/PMC7219121/ /pubmed/32412010 http://dx.doi.org/10.1016/j.fsisyn.2020.03.002 Text en © 2020 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Interdisciplinary Forensics
West, Frankie L.
Algee-Hewitt, Bridget F.B.
Cadaveric blood cards: Assessing DNA quality and quantity and the utility of STRs for the individual estimation of trihybrid ancestry and admixture proportions
title Cadaveric blood cards: Assessing DNA quality and quantity and the utility of STRs for the individual estimation of trihybrid ancestry and admixture proportions
title_full Cadaveric blood cards: Assessing DNA quality and quantity and the utility of STRs for the individual estimation of trihybrid ancestry and admixture proportions
title_fullStr Cadaveric blood cards: Assessing DNA quality and quantity and the utility of STRs for the individual estimation of trihybrid ancestry and admixture proportions
title_full_unstemmed Cadaveric blood cards: Assessing DNA quality and quantity and the utility of STRs for the individual estimation of trihybrid ancestry and admixture proportions
title_short Cadaveric blood cards: Assessing DNA quality and quantity and the utility of STRs for the individual estimation of trihybrid ancestry and admixture proportions
title_sort cadaveric blood cards: assessing dna quality and quantity and the utility of strs for the individual estimation of trihybrid ancestry and admixture proportions
topic Interdisciplinary Forensics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7219121/
https://www.ncbi.nlm.nih.gov/pubmed/32412010
http://dx.doi.org/10.1016/j.fsisyn.2020.03.002
work_keys_str_mv AT westfrankiel cadavericbloodcardsassessingdnaqualityandquantityandtheutilityofstrsfortheindividualestimationoftrihybridancestryandadmixtureproportions
AT algeehewittbridgetfb cadavericbloodcardsassessingdnaqualityandquantityandtheutilityofstrsfortheindividualestimationoftrihybridancestryandadmixtureproportions