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High GJB2 mRNA expression and its prognostic significance in lung adenocarcinoma: a study based on the TCGA database

Lung adenocarcinoma (LUAD), a form of lung cancer, is reported to cause first and second-order cancer morbidity to men and women in China, respectively. We assessed the mRNA expression of GJB2 in LUAD patients in our study, based on data acquired from the cancer genome atlas (TCGA) and so as to incr...

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Autores principales: Tang, Yun, Zhang, You-Jing, Wu, Zeng-Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer Health 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7220691/
https://www.ncbi.nlm.nih.gov/pubmed/32243356
http://dx.doi.org/10.1097/MD.0000000000019054
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author Tang, Yun
Zhang, You-Jing
Wu, Zeng-Hong
author_facet Tang, Yun
Zhang, You-Jing
Wu, Zeng-Hong
author_sort Tang, Yun
collection PubMed
description Lung adenocarcinoma (LUAD), a form of lung cancer, is reported to cause first and second-order cancer morbidity to men and women in China, respectively. We assessed the mRNA expression of GJB2 in LUAD patients in our study, based on data acquired from the cancer genome atlas (TCGA) and so as to increase further knowledge into the biological pathways involved in LUAD pathogenesis related to GJB2. Information on gene expression and comparing clinical data were recognized and downloaded from TCGA. Gene set enrichment analysis (GSEA) created an arranged list of all genes is indicated by their connection with GJB2 expression. Our study cohort included 265 (54.5%) female and 221 (36.0%) male patients. The scatter plot and paired plot showed the difference of GJB2 expression between normal and tumor samples (P < .01). Overall survival (OS) analysis demonstrated that LUAD with GJB2 -high had a more terrible prognosis than that with GJB2 -low (P < .01). Multivariate analysis with the cox proportional hazards model indicated that the expression of Cx26 (HR: 1.00; 95%CI: 1.00–1.01; P = .041) and stage (HR: 1.95; 95%CI: 1.23–3.09; P = .003) were independent prognostic factors for patients with LUAD. The GSEA results showed that cytosolic DNA sensing pathway, apoptosis, cytokine-cytokine receptor interaction, natural killer cell mediated cytotoxicity, regulation of actin cytoskeleton, toll-like receptor signaling pathway, small cell lung cancer and pathways in cancer are differentially enriched in GJB2 high expression phenotype. Our study confirmed the significantly high levels of Cx26 expression in LUAD patients with several observed clinical features. GJB2 may be a potentially useful prognostic molecular biomarker of bad survival in LUAD, while further experimental ought to be performed to demonstrate the biologic effect of GJB2.
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spelling pubmed-72206912020-06-15 High GJB2 mRNA expression and its prognostic significance in lung adenocarcinoma: a study based on the TCGA database Tang, Yun Zhang, You-Jing Wu, Zeng-Hong Medicine (Baltimore) 4100 Lung adenocarcinoma (LUAD), a form of lung cancer, is reported to cause first and second-order cancer morbidity to men and women in China, respectively. We assessed the mRNA expression of GJB2 in LUAD patients in our study, based on data acquired from the cancer genome atlas (TCGA) and so as to increase further knowledge into the biological pathways involved in LUAD pathogenesis related to GJB2. Information on gene expression and comparing clinical data were recognized and downloaded from TCGA. Gene set enrichment analysis (GSEA) created an arranged list of all genes is indicated by their connection with GJB2 expression. Our study cohort included 265 (54.5%) female and 221 (36.0%) male patients. The scatter plot and paired plot showed the difference of GJB2 expression between normal and tumor samples (P < .01). Overall survival (OS) analysis demonstrated that LUAD with GJB2 -high had a more terrible prognosis than that with GJB2 -low (P < .01). Multivariate analysis with the cox proportional hazards model indicated that the expression of Cx26 (HR: 1.00; 95%CI: 1.00–1.01; P = .041) and stage (HR: 1.95; 95%CI: 1.23–3.09; P = .003) were independent prognostic factors for patients with LUAD. The GSEA results showed that cytosolic DNA sensing pathway, apoptosis, cytokine-cytokine receptor interaction, natural killer cell mediated cytotoxicity, regulation of actin cytoskeleton, toll-like receptor signaling pathway, small cell lung cancer and pathways in cancer are differentially enriched in GJB2 high expression phenotype. Our study confirmed the significantly high levels of Cx26 expression in LUAD patients with several observed clinical features. GJB2 may be a potentially useful prognostic molecular biomarker of bad survival in LUAD, while further experimental ought to be performed to demonstrate the biologic effect of GJB2. Wolters Kluwer Health 2020-04-03 /pmc/articles/PMC7220691/ /pubmed/32243356 http://dx.doi.org/10.1097/MD.0000000000019054 Text en Copyright © 2020 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by-nc/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0
spellingShingle 4100
Tang, Yun
Zhang, You-Jing
Wu, Zeng-Hong
High GJB2 mRNA expression and its prognostic significance in lung adenocarcinoma: a study based on the TCGA database
title High GJB2 mRNA expression and its prognostic significance in lung adenocarcinoma: a study based on the TCGA database
title_full High GJB2 mRNA expression and its prognostic significance in lung adenocarcinoma: a study based on the TCGA database
title_fullStr High GJB2 mRNA expression and its prognostic significance in lung adenocarcinoma: a study based on the TCGA database
title_full_unstemmed High GJB2 mRNA expression and its prognostic significance in lung adenocarcinoma: a study based on the TCGA database
title_short High GJB2 mRNA expression and its prognostic significance in lung adenocarcinoma: a study based on the TCGA database
title_sort high gjb2 mrna expression and its prognostic significance in lung adenocarcinoma: a study based on the tcga database
topic 4100
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7220691/
https://www.ncbi.nlm.nih.gov/pubmed/32243356
http://dx.doi.org/10.1097/MD.0000000000019054
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