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Repeatability of Quantitative Imaging Features in Prostate Magnetic Resonance Imaging
Background: Multiparametric magnetic resonance imaging (mpMRI) has emerged as a non-invasive modality to diagnose and monitor prostate cancer. Quantitative metrics on the regions of abnormality have shown to be useful descriptors to discriminate clinically significant cancers. In this study, we eval...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7221156/ https://www.ncbi.nlm.nih.gov/pubmed/32457827 http://dx.doi.org/10.3389/fonc.2020.00551 |
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author | Lu, Hong Parra, Nestor A. Qi, Jin Gage, Kenneth Li, Qian Fan, Shuxuan Feuerlein, Sebastian Pow-Sang, Julio Gillies, Robert Choi, Jung W. Balagurunathan, Yoganand |
author_facet | Lu, Hong Parra, Nestor A. Qi, Jin Gage, Kenneth Li, Qian Fan, Shuxuan Feuerlein, Sebastian Pow-Sang, Julio Gillies, Robert Choi, Jung W. Balagurunathan, Yoganand |
author_sort | Lu, Hong |
collection | PubMed |
description | Background: Multiparametric magnetic resonance imaging (mpMRI) has emerged as a non-invasive modality to diagnose and monitor prostate cancer. Quantitative metrics on the regions of abnormality have shown to be useful descriptors to discriminate clinically significant cancers. In this study, we evaluate the reproducibility of quantitative imaging features using repeated mpMRI on the same patients. Methods: We retrospectively obtained the deidentified records of patients, who underwent two mpMRI scans within 2 weeks of the first baseline scan. The patient records were obtained as deidentified data (including imaging), obtained through the TCIA (The Cancer Imaging Archive) repository and analyzed in our institution with an institutional review board–approved Health Insurance Portability and Accountability Act–compliant retrospective study protocol. Indicated biopsied regions were used as a marker for our study radiologists to delineate the regions of interest. We extracted 307 quantitative features in each mpMRI modality [T2-weighted MR sequence image (T2w) and apparent diffusion coefficient (ADC) with b values of 0 and 1,400 mm/s(2)] across the two sequential scans. Concordance correlation coefficients (CCCs) were computed on the features extracted from sequential scans. Redundant features were removed by computing the coefficient of determination (R(2)) among them and replaced with a feature that had the highest dynamic range within intercorrelated groups. Results: We have assessed the reproducibility of quantitative imaging features among sequential scans and found that habitat region characterization improves repeatability in ADC maps. There were 19 T2w features and two ADC features in radiologist drawn regions (native raw image), compared to 18 T2w and 15 ADC features in habitat regions (sphere), which were reproducible (CCC ≥0.65) and non-redundant (R(2) ≥ 0.99). We also found that z-transformation of the images prior to feature extraction reduced the number of reproducible features with no detrimental effect. Conclusion: We have shown that there are quantitative imaging features that are reproducible across sequential prostate mpMRI acquisition at a preset level of filters. We also found that a habitat approach improves feature repeatability in ADC. A validated set of reproducible image features in mpMRI will allow us to develop clinically useful disease risk stratification, enabling the possibility of using imaging as a surrogate to invasive biopsies. |
format | Online Article Text |
id | pubmed-7221156 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72211562020-05-25 Repeatability of Quantitative Imaging Features in Prostate Magnetic Resonance Imaging Lu, Hong Parra, Nestor A. Qi, Jin Gage, Kenneth Li, Qian Fan, Shuxuan Feuerlein, Sebastian Pow-Sang, Julio Gillies, Robert Choi, Jung W. Balagurunathan, Yoganand Front Oncol Oncology Background: Multiparametric magnetic resonance imaging (mpMRI) has emerged as a non-invasive modality to diagnose and monitor prostate cancer. Quantitative metrics on the regions of abnormality have shown to be useful descriptors to discriminate clinically significant cancers. In this study, we evaluate the reproducibility of quantitative imaging features using repeated mpMRI on the same patients. Methods: We retrospectively obtained the deidentified records of patients, who underwent two mpMRI scans within 2 weeks of the first baseline scan. The patient records were obtained as deidentified data (including imaging), obtained through the TCIA (The Cancer Imaging Archive) repository and analyzed in our institution with an institutional review board–approved Health Insurance Portability and Accountability Act–compliant retrospective study protocol. Indicated biopsied regions were used as a marker for our study radiologists to delineate the regions of interest. We extracted 307 quantitative features in each mpMRI modality [T2-weighted MR sequence image (T2w) and apparent diffusion coefficient (ADC) with b values of 0 and 1,400 mm/s(2)] across the two sequential scans. Concordance correlation coefficients (CCCs) were computed on the features extracted from sequential scans. Redundant features were removed by computing the coefficient of determination (R(2)) among them and replaced with a feature that had the highest dynamic range within intercorrelated groups. Results: We have assessed the reproducibility of quantitative imaging features among sequential scans and found that habitat region characterization improves repeatability in ADC maps. There were 19 T2w features and two ADC features in radiologist drawn regions (native raw image), compared to 18 T2w and 15 ADC features in habitat regions (sphere), which were reproducible (CCC ≥0.65) and non-redundant (R(2) ≥ 0.99). We also found that z-transformation of the images prior to feature extraction reduced the number of reproducible features with no detrimental effect. Conclusion: We have shown that there are quantitative imaging features that are reproducible across sequential prostate mpMRI acquisition at a preset level of filters. We also found that a habitat approach improves feature repeatability in ADC. A validated set of reproducible image features in mpMRI will allow us to develop clinically useful disease risk stratification, enabling the possibility of using imaging as a surrogate to invasive biopsies. Frontiers Media S.A. 2020-05-07 /pmc/articles/PMC7221156/ /pubmed/32457827 http://dx.doi.org/10.3389/fonc.2020.00551 Text en Copyright © 2020 Lu, Parra, Qi, Gage, Li, Fan, Feuerlein, Pow-Sang, Gillies, Choi and Balagurunathan. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Lu, Hong Parra, Nestor A. Qi, Jin Gage, Kenneth Li, Qian Fan, Shuxuan Feuerlein, Sebastian Pow-Sang, Julio Gillies, Robert Choi, Jung W. Balagurunathan, Yoganand Repeatability of Quantitative Imaging Features in Prostate Magnetic Resonance Imaging |
title | Repeatability of Quantitative Imaging Features in Prostate Magnetic Resonance Imaging |
title_full | Repeatability of Quantitative Imaging Features in Prostate Magnetic Resonance Imaging |
title_fullStr | Repeatability of Quantitative Imaging Features in Prostate Magnetic Resonance Imaging |
title_full_unstemmed | Repeatability of Quantitative Imaging Features in Prostate Magnetic Resonance Imaging |
title_short | Repeatability of Quantitative Imaging Features in Prostate Magnetic Resonance Imaging |
title_sort | repeatability of quantitative imaging features in prostate magnetic resonance imaging |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7221156/ https://www.ncbi.nlm.nih.gov/pubmed/32457827 http://dx.doi.org/10.3389/fonc.2020.00551 |
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