Cargando…

Whole-Transcriptome Analysis of Dermal Fibroblasts, Derived from Three Pairs of Monozygotic Twins, Discordant for Parkinson’s Disease

Parkinson’s disease (PD) is one of the most common neurodegenerative diseases. In most cases, the development of the disease is sporadic and is not associated with any currently known mutations associated with PD. It is believed that changes associated with the epigenetic regulation of gene expressi...

Descripción completa

Detalles Bibliográficos
Autores principales: Alieva, Anelya Kh., Rudenok, Margarita M., Novosadova, Ekaterina V., Vlasov, Ivan N., Arsenyeva, Elena L., Rosinskaya, Anna V., Grivennikov, Igor A., Slominsky, Petr A., Shadrina, Maria I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7222158/
https://www.ncbi.nlm.nih.gov/pubmed/31823283
http://dx.doi.org/10.1007/s12031-019-01452-3
_version_ 1783533512258748416
author Alieva, Anelya Kh.
Rudenok, Margarita M.
Novosadova, Ekaterina V.
Vlasov, Ivan N.
Arsenyeva, Elena L.
Rosinskaya, Anna V.
Grivennikov, Igor A.
Slominsky, Petr A.
Shadrina, Maria I.
author_facet Alieva, Anelya Kh.
Rudenok, Margarita M.
Novosadova, Ekaterina V.
Vlasov, Ivan N.
Arsenyeva, Elena L.
Rosinskaya, Anna V.
Grivennikov, Igor A.
Slominsky, Petr A.
Shadrina, Maria I.
author_sort Alieva, Anelya Kh.
collection PubMed
description Parkinson’s disease (PD) is one of the most common neurodegenerative diseases. In most cases, the development of the disease is sporadic and is not associated with any currently known mutations associated with PD. It is believed that changes associated with the epigenetic regulation of gene expression may play an important role in the pathogenesis of this disease. The study of individuals with an almost identical genetic background, such as monozygotic twins, is one of the best approaches to the analysis of such changes. A whole-transcriptome analysis of dermal fibroblasts obtained from three pairs of monozygotic twins discordant for PD was carried out in this work. Twenty-nine differentially expressed genes were identified in the three pairs of twins. These genes were included in seven processes within two clusters, according to the results of an enrichment analysis. The cluster with the greatest statistical significance included processes associated with the regulation of the differentiation of fat cells, the action potential, and the regulation of glutamatergic synaptic transmission. The most significant genes, which occupied a central position in this cluster, were PTGS2, SCN9A, and GRIK2. These genes can be considered as potential candidate genes for PD. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s12031-019-01452-3) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-7222158
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Springer US
record_format MEDLINE/PubMed
spelling pubmed-72221582020-05-14 Whole-Transcriptome Analysis of Dermal Fibroblasts, Derived from Three Pairs of Monozygotic Twins, Discordant for Parkinson’s Disease Alieva, Anelya Kh. Rudenok, Margarita M. Novosadova, Ekaterina V. Vlasov, Ivan N. Arsenyeva, Elena L. Rosinskaya, Anna V. Grivennikov, Igor A. Slominsky, Petr A. Shadrina, Maria I. J Mol Neurosci Article Parkinson’s disease (PD) is one of the most common neurodegenerative diseases. In most cases, the development of the disease is sporadic and is not associated with any currently known mutations associated with PD. It is believed that changes associated with the epigenetic regulation of gene expression may play an important role in the pathogenesis of this disease. The study of individuals with an almost identical genetic background, such as monozygotic twins, is one of the best approaches to the analysis of such changes. A whole-transcriptome analysis of dermal fibroblasts obtained from three pairs of monozygotic twins discordant for PD was carried out in this work. Twenty-nine differentially expressed genes were identified in the three pairs of twins. These genes were included in seven processes within two clusters, according to the results of an enrichment analysis. The cluster with the greatest statistical significance included processes associated with the regulation of the differentiation of fat cells, the action potential, and the regulation of glutamatergic synaptic transmission. The most significant genes, which occupied a central position in this cluster, were PTGS2, SCN9A, and GRIK2. These genes can be considered as potential candidate genes for PD. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s12031-019-01452-3) contains supplementary material, which is available to authorized users. Springer US 2019-12-10 2020 /pmc/articles/PMC7222158/ /pubmed/31823283 http://dx.doi.org/10.1007/s12031-019-01452-3 Text en © Springer Science+Business Media, LLC, part of Springer Nature 2019 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Alieva, Anelya Kh.
Rudenok, Margarita M.
Novosadova, Ekaterina V.
Vlasov, Ivan N.
Arsenyeva, Elena L.
Rosinskaya, Anna V.
Grivennikov, Igor A.
Slominsky, Petr A.
Shadrina, Maria I.
Whole-Transcriptome Analysis of Dermal Fibroblasts, Derived from Three Pairs of Monozygotic Twins, Discordant for Parkinson’s Disease
title Whole-Transcriptome Analysis of Dermal Fibroblasts, Derived from Three Pairs of Monozygotic Twins, Discordant for Parkinson’s Disease
title_full Whole-Transcriptome Analysis of Dermal Fibroblasts, Derived from Three Pairs of Monozygotic Twins, Discordant for Parkinson’s Disease
title_fullStr Whole-Transcriptome Analysis of Dermal Fibroblasts, Derived from Three Pairs of Monozygotic Twins, Discordant for Parkinson’s Disease
title_full_unstemmed Whole-Transcriptome Analysis of Dermal Fibroblasts, Derived from Three Pairs of Monozygotic Twins, Discordant for Parkinson’s Disease
title_short Whole-Transcriptome Analysis of Dermal Fibroblasts, Derived from Three Pairs of Monozygotic Twins, Discordant for Parkinson’s Disease
title_sort whole-transcriptome analysis of dermal fibroblasts, derived from three pairs of monozygotic twins, discordant for parkinson’s disease
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7222158/
https://www.ncbi.nlm.nih.gov/pubmed/31823283
http://dx.doi.org/10.1007/s12031-019-01452-3
work_keys_str_mv AT alievaanelyakh wholetranscriptomeanalysisofdermalfibroblastsderivedfromthreepairsofmonozygotictwinsdiscordantforparkinsonsdisease
AT rudenokmargaritam wholetranscriptomeanalysisofdermalfibroblastsderivedfromthreepairsofmonozygotictwinsdiscordantforparkinsonsdisease
AT novosadovaekaterinav wholetranscriptomeanalysisofdermalfibroblastsderivedfromthreepairsofmonozygotictwinsdiscordantforparkinsonsdisease
AT vlasovivann wholetranscriptomeanalysisofdermalfibroblastsderivedfromthreepairsofmonozygotictwinsdiscordantforparkinsonsdisease
AT arsenyevaelenal wholetranscriptomeanalysisofdermalfibroblastsderivedfromthreepairsofmonozygotictwinsdiscordantforparkinsonsdisease
AT rosinskayaannav wholetranscriptomeanalysisofdermalfibroblastsderivedfromthreepairsofmonozygotictwinsdiscordantforparkinsonsdisease
AT grivennikovigora wholetranscriptomeanalysisofdermalfibroblastsderivedfromthreepairsofmonozygotictwinsdiscordantforparkinsonsdisease
AT slominskypetra wholetranscriptomeanalysisofdermalfibroblastsderivedfromthreepairsofmonozygotictwinsdiscordantforparkinsonsdisease
AT shadrinamariai wholetranscriptomeanalysisofdermalfibroblastsderivedfromthreepairsofmonozygotictwinsdiscordantforparkinsonsdisease