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Intron and gene size expansion during nervous system evolution
BACKGROUND: The evolutionary radiation of animals was accompanied by extensive expansion of gene and genome sizes, increased isoform diversity, and complexity of regulation. RESULTS: Here we show that the longest genes are enriched for expression in neuronal tissues of diverse vertebrates and of inv...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7222433/ https://www.ncbi.nlm.nih.gov/pubmed/32410625 http://dx.doi.org/10.1186/s12864-020-6760-4 |
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author | McCoy, Matthew J. Fire, Andrew Z. |
author_facet | McCoy, Matthew J. Fire, Andrew Z. |
author_sort | McCoy, Matthew J. |
collection | PubMed |
description | BACKGROUND: The evolutionary radiation of animals was accompanied by extensive expansion of gene and genome sizes, increased isoform diversity, and complexity of regulation. RESULTS: Here we show that the longest genes are enriched for expression in neuronal tissues of diverse vertebrates and of invertebrates. Additionally, we show that neuronal gene size expansion occurred predominantly through net gains in intron size, with a positional bias toward the 5′ end of each gene. CONCLUSIONS: We find that intron and gene size expansion is a feature of many genes whose expression is enriched in nervous systems. We speculate that unique attributes of neurons may subject neuronal genes to evolutionary forces favoring net size expansion. This process could be associated with tissue-specific constraints on gene function and/or the evolution of increasingly complex gene regulation in nervous systems. |
format | Online Article Text |
id | pubmed-7222433 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-72224332020-05-20 Intron and gene size expansion during nervous system evolution McCoy, Matthew J. Fire, Andrew Z. BMC Genomics Research Article BACKGROUND: The evolutionary radiation of animals was accompanied by extensive expansion of gene and genome sizes, increased isoform diversity, and complexity of regulation. RESULTS: Here we show that the longest genes are enriched for expression in neuronal tissues of diverse vertebrates and of invertebrates. Additionally, we show that neuronal gene size expansion occurred predominantly through net gains in intron size, with a positional bias toward the 5′ end of each gene. CONCLUSIONS: We find that intron and gene size expansion is a feature of many genes whose expression is enriched in nervous systems. We speculate that unique attributes of neurons may subject neuronal genes to evolutionary forces favoring net size expansion. This process could be associated with tissue-specific constraints on gene function and/or the evolution of increasingly complex gene regulation in nervous systems. BioMed Central 2020-05-14 /pmc/articles/PMC7222433/ /pubmed/32410625 http://dx.doi.org/10.1186/s12864-020-6760-4 Text en © The Author(s). 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article McCoy, Matthew J. Fire, Andrew Z. Intron and gene size expansion during nervous system evolution |
title | Intron and gene size expansion during nervous system evolution |
title_full | Intron and gene size expansion during nervous system evolution |
title_fullStr | Intron and gene size expansion during nervous system evolution |
title_full_unstemmed | Intron and gene size expansion during nervous system evolution |
title_short | Intron and gene size expansion during nervous system evolution |
title_sort | intron and gene size expansion during nervous system evolution |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7222433/ https://www.ncbi.nlm.nih.gov/pubmed/32410625 http://dx.doi.org/10.1186/s12864-020-6760-4 |
work_keys_str_mv | AT mccoymatthewj intronandgenesizeexpansionduringnervoussystemevolution AT fireandrewz intronandgenesizeexpansionduringnervoussystemevolution |