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Adaptive Incremental Mixture Markov Chain Monte Carlo

We propose adaptive incremental mixture Markov chain Monte Carlo (AIMM), a novel approach to sample from challenging probability distributions defined on a general state-space. While adaptive MCMC methods usually update a parametric proposal kernel with a global rule, AIMM locally adapts a semiparam...

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Detalles Bibliográficos
Autores principales: Maire, Florian, Friel, Nial, Mira, Antonietta, Raftery, Adrian E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7224357/
https://www.ncbi.nlm.nih.gov/pubmed/32410811
http://dx.doi.org/10.1080/10618600.2019.1598872
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author Maire, Florian
Friel, Nial
Mira, Antonietta
Raftery, Adrian E.
author_facet Maire, Florian
Friel, Nial
Mira, Antonietta
Raftery, Adrian E.
author_sort Maire, Florian
collection PubMed
description We propose adaptive incremental mixture Markov chain Monte Carlo (AIMM), a novel approach to sample from challenging probability distributions defined on a general state-space. While adaptive MCMC methods usually update a parametric proposal kernel with a global rule, AIMM locally adapts a semiparametric kernel. AIMM is based on an independent Metropolis–Hastings proposal distribution which takes the form of a finite mixture of Gaussian distributions. Central to this approach is the idea that the proposal distribution adapts to the target by locally adding a mixture component when the discrepancy between the proposal mixture and the target is deemed to be too large. As a result, the number of components in the mixture proposal is not fixed in advance. Theoretically, we prove that there exists a stochastic process that can be made arbitrarily close to AIMM and that converges to the correct target distribution. We also illustrate that it performs well in practice in a variety of challenging situations, including high-dimensional and multimodal target distributions. Finally, the methodology is successfully applied to two real data examples, including the Bayesian inference of a semiparametric regression model for the Boston Housing dataset. Supplementary materials for this article are available online.
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spelling pubmed-72243572020-05-14 Adaptive Incremental Mixture Markov Chain Monte Carlo Maire, Florian Friel, Nial Mira, Antonietta Raftery, Adrian E. J Comput Graph Stat Article We propose adaptive incremental mixture Markov chain Monte Carlo (AIMM), a novel approach to sample from challenging probability distributions defined on a general state-space. While adaptive MCMC methods usually update a parametric proposal kernel with a global rule, AIMM locally adapts a semiparametric kernel. AIMM is based on an independent Metropolis–Hastings proposal distribution which takes the form of a finite mixture of Gaussian distributions. Central to this approach is the idea that the proposal distribution adapts to the target by locally adding a mixture component when the discrepancy between the proposal mixture and the target is deemed to be too large. As a result, the number of components in the mixture proposal is not fixed in advance. Theoretically, we prove that there exists a stochastic process that can be made arbitrarily close to AIMM and that converges to the correct target distribution. We also illustrate that it performs well in practice in a variety of challenging situations, including high-dimensional and multimodal target distributions. Finally, the methodology is successfully applied to two real data examples, including the Bayesian inference of a semiparametric regression model for the Boston Housing dataset. Supplementary materials for this article are available online. 2019-06-07 2019 /pmc/articles/PMC7224357/ /pubmed/32410811 http://dx.doi.org/10.1080/10618600.2019.1598872 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way.
spellingShingle Article
Maire, Florian
Friel, Nial
Mira, Antonietta
Raftery, Adrian E.
Adaptive Incremental Mixture Markov Chain Monte Carlo
title Adaptive Incremental Mixture Markov Chain Monte Carlo
title_full Adaptive Incremental Mixture Markov Chain Monte Carlo
title_fullStr Adaptive Incremental Mixture Markov Chain Monte Carlo
title_full_unstemmed Adaptive Incremental Mixture Markov Chain Monte Carlo
title_short Adaptive Incremental Mixture Markov Chain Monte Carlo
title_sort adaptive incremental mixture markov chain monte carlo
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7224357/
https://www.ncbi.nlm.nih.gov/pubmed/32410811
http://dx.doi.org/10.1080/10618600.2019.1598872
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