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Reconstructing and forecasting the COVID-19 epidemic in the United States using a 5-parameter logistic growth model

BACKGROUND: Many studies have modeled and predicted the spread of COVID-19 (coronavirus disease 2019) in the U.S. using data that begins with the first reported cases. However, the shortage of testing services to detect infected persons makes this approach subject to error due to its underdetection...

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Autores principales: Chen, Ding-Geng, Chen, Xinguang, Chen, Jenny K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7225094/
https://www.ncbi.nlm.nih.gov/pubmed/32435695
http://dx.doi.org/10.1186/s41256-020-00152-5
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author Chen, Ding-Geng
Chen, Xinguang
Chen, Jenny K.
author_facet Chen, Ding-Geng
Chen, Xinguang
Chen, Jenny K.
author_sort Chen, Ding-Geng
collection PubMed
description BACKGROUND: Many studies have modeled and predicted the spread of COVID-19 (coronavirus disease 2019) in the U.S. using data that begins with the first reported cases. However, the shortage of testing services to detect infected persons makes this approach subject to error due to its underdetection of early cases in the U.S. Our new approach overcomes this limitation and provides data supporting the public policy decisions intended to combat the spread of COVID-19 epidemic. METHODS: We used Centers for Disease Control and Prevention data documenting the daily new and cumulative cases of confirmed COVID-19 in the U.S. from January 22 to April 6, 2020, and reconstructed the epidemic using a 5-parameter logistic growth model. We fitted our model to data from a 2-week window (i.e., from March 21 to April 4, approximately one incubation period) during which large-scale testing was being conducted. With parameters obtained from this modeling, we reconstructed and predicted the growth of the epidemic and evaluated the extent and potential effects of underdetection. RESULTS: The data fit the model satisfactorily. The estimated daily growth rate was 16.8% overall with 95% CI: [15.95, 17.76%], suggesting a doubling period of 4 days. Based on the modeling result, the tipping point at which new cases will begin to decline will be on April 7th, 2020, with a peak of 32,860 new cases on that day. By the end of the epidemic, at least 792,548 (95% CI: [789,162, 795,934]) will be infected in the U.S. Based on our model, a total of 12,029 cases were not detected between January 22 (when the first case was detected in the U.S.) and April 4. CONCLUSIONS: Our findings demonstrate the utility of a 5-parameter logistic growth model with reliable data that comes from a specified period during which governmental interventions were appropriately implemented. Beyond informing public health decision-making, our model adds a tool for more faithfully capturing the spread of the COVID-19 epidemic.
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spelling pubmed-72250942020-05-15 Reconstructing and forecasting the COVID-19 epidemic in the United States using a 5-parameter logistic growth model Chen, Ding-Geng Chen, Xinguang Chen, Jenny K. Glob Health Res Policy Research BACKGROUND: Many studies have modeled and predicted the spread of COVID-19 (coronavirus disease 2019) in the U.S. using data that begins with the first reported cases. However, the shortage of testing services to detect infected persons makes this approach subject to error due to its underdetection of early cases in the U.S. Our new approach overcomes this limitation and provides data supporting the public policy decisions intended to combat the spread of COVID-19 epidemic. METHODS: We used Centers for Disease Control and Prevention data documenting the daily new and cumulative cases of confirmed COVID-19 in the U.S. from January 22 to April 6, 2020, and reconstructed the epidemic using a 5-parameter logistic growth model. We fitted our model to data from a 2-week window (i.e., from March 21 to April 4, approximately one incubation period) during which large-scale testing was being conducted. With parameters obtained from this modeling, we reconstructed and predicted the growth of the epidemic and evaluated the extent and potential effects of underdetection. RESULTS: The data fit the model satisfactorily. The estimated daily growth rate was 16.8% overall with 95% CI: [15.95, 17.76%], suggesting a doubling period of 4 days. Based on the modeling result, the tipping point at which new cases will begin to decline will be on April 7th, 2020, with a peak of 32,860 new cases on that day. By the end of the epidemic, at least 792,548 (95% CI: [789,162, 795,934]) will be infected in the U.S. Based on our model, a total of 12,029 cases were not detected between January 22 (when the first case was detected in the U.S.) and April 4. CONCLUSIONS: Our findings demonstrate the utility of a 5-parameter logistic growth model with reliable data that comes from a specified period during which governmental interventions were appropriately implemented. Beyond informing public health decision-making, our model adds a tool for more faithfully capturing the spread of the COVID-19 epidemic. BioMed Central 2020-05-15 /pmc/articles/PMC7225094/ /pubmed/32435695 http://dx.doi.org/10.1186/s41256-020-00152-5 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Research
Chen, Ding-Geng
Chen, Xinguang
Chen, Jenny K.
Reconstructing and forecasting the COVID-19 epidemic in the United States using a 5-parameter logistic growth model
title Reconstructing and forecasting the COVID-19 epidemic in the United States using a 5-parameter logistic growth model
title_full Reconstructing and forecasting the COVID-19 epidemic in the United States using a 5-parameter logistic growth model
title_fullStr Reconstructing and forecasting the COVID-19 epidemic in the United States using a 5-parameter logistic growth model
title_full_unstemmed Reconstructing and forecasting the COVID-19 epidemic in the United States using a 5-parameter logistic growth model
title_short Reconstructing and forecasting the COVID-19 epidemic in the United States using a 5-parameter logistic growth model
title_sort reconstructing and forecasting the covid-19 epidemic in the united states using a 5-parameter logistic growth model
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7225094/
https://www.ncbi.nlm.nih.gov/pubmed/32435695
http://dx.doi.org/10.1186/s41256-020-00152-5
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