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Expression of long noncoding RNAs in cancer‐associated fibroblasts linked to patient survival in ovarian cancer
Cancer‐associated fibroblasts (CAFs) are the most abundant cell type in the tumor microenvironment and are responsible for producing the desmoplastic reaction that is a poor prognostic factor in ovarian cancer. Long non‐coding RNAs (lncRNAs) have been shown to play important roles in cancer. However...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7226184/ https://www.ncbi.nlm.nih.gov/pubmed/32058624 http://dx.doi.org/10.1111/cas.14350 |
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author | Colvin, Emily K. Howell, Viive M. Mok, Samuel C. Samimi, Goli Vafaee, Fatemeh |
author_facet | Colvin, Emily K. Howell, Viive M. Mok, Samuel C. Samimi, Goli Vafaee, Fatemeh |
author_sort | Colvin, Emily K. |
collection | PubMed |
description | Cancer‐associated fibroblasts (CAFs) are the most abundant cell type in the tumor microenvironment and are responsible for producing the desmoplastic reaction that is a poor prognostic factor in ovarian cancer. Long non‐coding RNAs (lncRNAs) have been shown to play important roles in cancer. However, very little is known about the role of lncRNAs in the tumor microenvironment. We aimed to identify lncRNAs expressed in ovarian CAFs that were associated with patient survival and used computational approaches to predict their function. Increased expression of 9 lncRNAs and decreased expression of 1 lncRNA in ovarian CAFs were found to be associated with poorer overall survival. A “guilt‐by‐association” approach was used to predict the function of these lncRNAs. In particular, MIR155HG was predicted to play a role in immune response. Further investigation revealed high MIR155HG expression to be associated with higher infiltrates of immune cell subsets. In conclusion, these data indicate expression on several lncRNAs in CAFs are associated with patient survival and are likely to play an important role in regulating CAF function. |
format | Online Article Text |
id | pubmed-7226184 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72261842020-05-18 Expression of long noncoding RNAs in cancer‐associated fibroblasts linked to patient survival in ovarian cancer Colvin, Emily K. Howell, Viive M. Mok, Samuel C. Samimi, Goli Vafaee, Fatemeh Cancer Sci Original Articles Cancer‐associated fibroblasts (CAFs) are the most abundant cell type in the tumor microenvironment and are responsible for producing the desmoplastic reaction that is a poor prognostic factor in ovarian cancer. Long non‐coding RNAs (lncRNAs) have been shown to play important roles in cancer. However, very little is known about the role of lncRNAs in the tumor microenvironment. We aimed to identify lncRNAs expressed in ovarian CAFs that were associated with patient survival and used computational approaches to predict their function. Increased expression of 9 lncRNAs and decreased expression of 1 lncRNA in ovarian CAFs were found to be associated with poorer overall survival. A “guilt‐by‐association” approach was used to predict the function of these lncRNAs. In particular, MIR155HG was predicted to play a role in immune response. Further investigation revealed high MIR155HG expression to be associated with higher infiltrates of immune cell subsets. In conclusion, these data indicate expression on several lncRNAs in CAFs are associated with patient survival and are likely to play an important role in regulating CAF function. John Wiley and Sons Inc. 2020-03-28 2020-05 /pmc/articles/PMC7226184/ /pubmed/32058624 http://dx.doi.org/10.1111/cas.14350 Text en © 2020 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Original Articles Colvin, Emily K. Howell, Viive M. Mok, Samuel C. Samimi, Goli Vafaee, Fatemeh Expression of long noncoding RNAs in cancer‐associated fibroblasts linked to patient survival in ovarian cancer |
title | Expression of long noncoding RNAs in cancer‐associated fibroblasts linked to patient survival in ovarian cancer |
title_full | Expression of long noncoding RNAs in cancer‐associated fibroblasts linked to patient survival in ovarian cancer |
title_fullStr | Expression of long noncoding RNAs in cancer‐associated fibroblasts linked to patient survival in ovarian cancer |
title_full_unstemmed | Expression of long noncoding RNAs in cancer‐associated fibroblasts linked to patient survival in ovarian cancer |
title_short | Expression of long noncoding RNAs in cancer‐associated fibroblasts linked to patient survival in ovarian cancer |
title_sort | expression of long noncoding rnas in cancer‐associated fibroblasts linked to patient survival in ovarian cancer |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7226184/ https://www.ncbi.nlm.nih.gov/pubmed/32058624 http://dx.doi.org/10.1111/cas.14350 |
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