Cargando…

Epigenetic Requirements for Triggering Heterochromatinization and Piwi-Interacting RNA Production from Transgenes in the Drosophila Germline

Transgenes containing a fragment of the I retrotransposon represent a powerful model of piRNA cluster de novo formation in the Drosophila germline. We revealed that the same transgenes located at different genomic loci form piRNA clusters with various capacity of small RNA production. Transgenic piR...

Descripción completa

Detalles Bibliográficos
Autores principales: Komarov, Pavel A., Sokolova, Olesya, Akulenko, Natalia, Brasset, Emilie, Jensen, Silke, Kalmykova, Alla
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7226800/
https://www.ncbi.nlm.nih.gov/pubmed/32290057
http://dx.doi.org/10.3390/cells9040922
_version_ 1783534365003743232
author Komarov, Pavel A.
Sokolova, Olesya
Akulenko, Natalia
Brasset, Emilie
Jensen, Silke
Kalmykova, Alla
author_facet Komarov, Pavel A.
Sokolova, Olesya
Akulenko, Natalia
Brasset, Emilie
Jensen, Silke
Kalmykova, Alla
author_sort Komarov, Pavel A.
collection PubMed
description Transgenes containing a fragment of the I retrotransposon represent a powerful model of piRNA cluster de novo formation in the Drosophila germline. We revealed that the same transgenes located at different genomic loci form piRNA clusters with various capacity of small RNA production. Transgenic piRNA clusters are not established in piRNA pathway mutants. However, in the wild-type context, the endogenous ancestral I-related piRNAs heterochromatinize and convert the I-containing transgenes into piRNA-producing loci. Here, we address how the quantitative level of piRNAs influences the heterochromatinization and piRNA production. We show that a minimal amount of maternal piRNAs from ancestral I-elements is sufficient to form the transgenic piRNA clusters. Supplemental piRNAs stemming from active I-element copies do not stimulate additional chromatin changes or piRNA production from transgenes. Therefore, chromatin changes and piRNA production are initiated by a minimum threshold level of complementary piRNAs, suggesting a selective advantage of prompt cell response to the lowest level of piRNAs. It is noteworthy that the weak piRNA clusters do not transform into strong ones after being targeted by abundant I-specific piRNAs, indicating the importance of the genomic context for piRNA cluster establishment. Analysis of ovarian transcription profiles suggests that regions facilitating convergent transcription favor the formation of transgenic piRNA clusters.
format Online
Article
Text
id pubmed-7226800
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-72268002020-05-18 Epigenetic Requirements for Triggering Heterochromatinization and Piwi-Interacting RNA Production from Transgenes in the Drosophila Germline Komarov, Pavel A. Sokolova, Olesya Akulenko, Natalia Brasset, Emilie Jensen, Silke Kalmykova, Alla Cells Article Transgenes containing a fragment of the I retrotransposon represent a powerful model of piRNA cluster de novo formation in the Drosophila germline. We revealed that the same transgenes located at different genomic loci form piRNA clusters with various capacity of small RNA production. Transgenic piRNA clusters are not established in piRNA pathway mutants. However, in the wild-type context, the endogenous ancestral I-related piRNAs heterochromatinize and convert the I-containing transgenes into piRNA-producing loci. Here, we address how the quantitative level of piRNAs influences the heterochromatinization and piRNA production. We show that a minimal amount of maternal piRNAs from ancestral I-elements is sufficient to form the transgenic piRNA clusters. Supplemental piRNAs stemming from active I-element copies do not stimulate additional chromatin changes or piRNA production from transgenes. Therefore, chromatin changes and piRNA production are initiated by a minimum threshold level of complementary piRNAs, suggesting a selective advantage of prompt cell response to the lowest level of piRNAs. It is noteworthy that the weak piRNA clusters do not transform into strong ones after being targeted by abundant I-specific piRNAs, indicating the importance of the genomic context for piRNA cluster establishment. Analysis of ovarian transcription profiles suggests that regions facilitating convergent transcription favor the formation of transgenic piRNA clusters. MDPI 2020-04-10 /pmc/articles/PMC7226800/ /pubmed/32290057 http://dx.doi.org/10.3390/cells9040922 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Komarov, Pavel A.
Sokolova, Olesya
Akulenko, Natalia
Brasset, Emilie
Jensen, Silke
Kalmykova, Alla
Epigenetic Requirements for Triggering Heterochromatinization and Piwi-Interacting RNA Production from Transgenes in the Drosophila Germline
title Epigenetic Requirements for Triggering Heterochromatinization and Piwi-Interacting RNA Production from Transgenes in the Drosophila Germline
title_full Epigenetic Requirements for Triggering Heterochromatinization and Piwi-Interacting RNA Production from Transgenes in the Drosophila Germline
title_fullStr Epigenetic Requirements for Triggering Heterochromatinization and Piwi-Interacting RNA Production from Transgenes in the Drosophila Germline
title_full_unstemmed Epigenetic Requirements for Triggering Heterochromatinization and Piwi-Interacting RNA Production from Transgenes in the Drosophila Germline
title_short Epigenetic Requirements for Triggering Heterochromatinization and Piwi-Interacting RNA Production from Transgenes in the Drosophila Germline
title_sort epigenetic requirements for triggering heterochromatinization and piwi-interacting rna production from transgenes in the drosophila germline
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7226800/
https://www.ncbi.nlm.nih.gov/pubmed/32290057
http://dx.doi.org/10.3390/cells9040922
work_keys_str_mv AT komarovpavela epigeneticrequirementsfortriggeringheterochromatinizationandpiwiinteractingrnaproductionfromtransgenesinthedrosophilagermline
AT sokolovaolesya epigeneticrequirementsfortriggeringheterochromatinizationandpiwiinteractingrnaproductionfromtransgenesinthedrosophilagermline
AT akulenkonatalia epigeneticrequirementsfortriggeringheterochromatinizationandpiwiinteractingrnaproductionfromtransgenesinthedrosophilagermline
AT brassetemilie epigeneticrequirementsfortriggeringheterochromatinizationandpiwiinteractingrnaproductionfromtransgenesinthedrosophilagermline
AT jensensilke epigeneticrequirementsfortriggeringheterochromatinizationandpiwiinteractingrnaproductionfromtransgenesinthedrosophilagermline
AT kalmykovaalla epigeneticrequirementsfortriggeringheterochromatinizationandpiwiinteractingrnaproductionfromtransgenesinthedrosophilagermline