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Network Reconstruction and Community Detection from Dynamics
We present a scalable nonparametric Bayesian method to perform network reconstruction from observed functional behavior that at the same time infers the communities present in the network. We show that the joint reconstruction with community detection has a synergistic effect, where the edge correla...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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American Physical Society
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7226905/ https://www.ncbi.nlm.nih.gov/pubmed/31633974 http://dx.doi.org/10.1103/PhysRevLett.123.128301 |
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author | Peixoto, Tiago P. |
author_facet | Peixoto, Tiago P. |
author_sort | Peixoto, Tiago P. |
collection | PubMed |
description | We present a scalable nonparametric Bayesian method to perform network reconstruction from observed functional behavior that at the same time infers the communities present in the network. We show that the joint reconstruction with community detection has a synergistic effect, where the edge correlations used to inform the existence of communities are also inherently used to improve the accuracy of the reconstruction which, in turn, can better inform the uncovering of communities. We illustrate the use of our method with observations arising from epidemic models and the Ising model, both on synthetic and empirical networks, as well as on data containing only functional information. |
format | Online Article Text |
id | pubmed-7226905 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | American Physical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-72269052020-05-15 Network Reconstruction and Community Detection from Dynamics Peixoto, Tiago P. Phys Rev Lett Letters We present a scalable nonparametric Bayesian method to perform network reconstruction from observed functional behavior that at the same time infers the communities present in the network. We show that the joint reconstruction with community detection has a synergistic effect, where the edge correlations used to inform the existence of communities are also inherently used to improve the accuracy of the reconstruction which, in turn, can better inform the uncovering of communities. We illustrate the use of our method with observations arising from epidemic models and the Ising model, both on synthetic and empirical networks, as well as on data containing only functional information. American Physical Society 2019-09-18 2019-09-20 /pmc/articles/PMC7226905/ /pubmed/31633974 http://dx.doi.org/10.1103/PhysRevLett.123.128301 Text en © 2019 American Physical Society This article is made available via the PMC Open Access Subset for unrestricted re-use and analyses in any form or by any means with acknowledgement of the original source. |
spellingShingle | Letters Peixoto, Tiago P. Network Reconstruction and Community Detection from Dynamics |
title | Network Reconstruction and Community Detection from Dynamics |
title_full | Network Reconstruction and Community Detection from Dynamics |
title_fullStr | Network Reconstruction and Community Detection from Dynamics |
title_full_unstemmed | Network Reconstruction and Community Detection from Dynamics |
title_short | Network Reconstruction and Community Detection from Dynamics |
title_sort | network reconstruction and community detection from dynamics |
topic | Letters |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7226905/ https://www.ncbi.nlm.nih.gov/pubmed/31633974 http://dx.doi.org/10.1103/PhysRevLett.123.128301 |
work_keys_str_mv | AT peixototiagop networkreconstructionandcommunitydetectionfromdynamics |