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Network Reconstruction and Community Detection from Dynamics

We present a scalable nonparametric Bayesian method to perform network reconstruction from observed functional behavior that at the same time infers the communities present in the network. We show that the joint reconstruction with community detection has a synergistic effect, where the edge correla...

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Detalles Bibliográficos
Autor principal: Peixoto, Tiago P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Physical Society 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7226905/
https://www.ncbi.nlm.nih.gov/pubmed/31633974
http://dx.doi.org/10.1103/PhysRevLett.123.128301
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author Peixoto, Tiago P.
author_facet Peixoto, Tiago P.
author_sort Peixoto, Tiago P.
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description We present a scalable nonparametric Bayesian method to perform network reconstruction from observed functional behavior that at the same time infers the communities present in the network. We show that the joint reconstruction with community detection has a synergistic effect, where the edge correlations used to inform the existence of communities are also inherently used to improve the accuracy of the reconstruction which, in turn, can better inform the uncovering of communities. We illustrate the use of our method with observations arising from epidemic models and the Ising model, both on synthetic and empirical networks, as well as on data containing only functional information.
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spelling pubmed-72269052020-05-15 Network Reconstruction and Community Detection from Dynamics Peixoto, Tiago P. Phys Rev Lett Letters We present a scalable nonparametric Bayesian method to perform network reconstruction from observed functional behavior that at the same time infers the communities present in the network. We show that the joint reconstruction with community detection has a synergistic effect, where the edge correlations used to inform the existence of communities are also inherently used to improve the accuracy of the reconstruction which, in turn, can better inform the uncovering of communities. We illustrate the use of our method with observations arising from epidemic models and the Ising model, both on synthetic and empirical networks, as well as on data containing only functional information. American Physical Society 2019-09-18 2019-09-20 /pmc/articles/PMC7226905/ /pubmed/31633974 http://dx.doi.org/10.1103/PhysRevLett.123.128301 Text en © 2019 American Physical Society This article is made available via the PMC Open Access Subset for unrestricted re-use and analyses in any form or by any means with acknowledgement of the original source.
spellingShingle Letters
Peixoto, Tiago P.
Network Reconstruction and Community Detection from Dynamics
title Network Reconstruction and Community Detection from Dynamics
title_full Network Reconstruction and Community Detection from Dynamics
title_fullStr Network Reconstruction and Community Detection from Dynamics
title_full_unstemmed Network Reconstruction and Community Detection from Dynamics
title_short Network Reconstruction and Community Detection from Dynamics
title_sort network reconstruction and community detection from dynamics
topic Letters
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7226905/
https://www.ncbi.nlm.nih.gov/pubmed/31633974
http://dx.doi.org/10.1103/PhysRevLett.123.128301
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