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Prognostic implication and functional exploration for microRNA-20a as a molecular biomarker of gastrointestinal cancer
BACKGROUND: It is generally accepted that microRNA-20a (miR-20a) is aberrantly expressed in gastrointestinal cancer (GIC), and may be associated with the prognosis of GIC patients. Nevertheless, the clinical prognostic value of miR-20a expression in GIC remains controversial. METHODS: We first condu...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7227208/ https://www.ncbi.nlm.nih.gov/pubmed/32410584 http://dx.doi.org/10.1186/s12885-020-06875-5 |
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author | Peng, Qiliang Zhao, Peifeng Shen, Yi Cheng, Ming Wu, Yongyou Zhu, Yaqun |
author_facet | Peng, Qiliang Zhao, Peifeng Shen, Yi Cheng, Ming Wu, Yongyou Zhu, Yaqun |
author_sort | Peng, Qiliang |
collection | PubMed |
description | BACKGROUND: It is generally accepted that microRNA-20a (miR-20a) is aberrantly expressed in gastrointestinal cancer (GIC), and may be associated with the prognosis of GIC patients. Nevertheless, the clinical prognostic value of miR-20a expression in GIC remains controversial. METHODS: We first conducted a comprehensive literature search of the clinical data and pooled them for evidence in assessing prognostic significance of miR-20a expression in GIC. Afterwards, we applied some bioinformatic analysis methods to explore the biological function of miR-20a and explain why miR-20a could act as an effective biomarker. RESULTS: The pooled results showed that enhanced miR-20a expression was significantly associated with poor survival in GIC patients (HR: 1.36; 95%CI: 1.21–1.52; P < 0.001). According to the subgroup analysis, the ethnicity, cancer type, sample source, and sample size may have an impact on the predictive roles for miR-20a. The gene ontologies enriched by the predicted miR-20a targets were highly associated with some important biological processes, cell components and molecular functions. Moreover, a series of prominent pathways linked with GIC carcinogenesis were identified. Ultimately, the crucial targets and modules were identified by constructing the protein-protein interaction network of miR-20a targets, which were highly associated with the initiation and progression of GIC according to previous molecular biology experiments. CONCLUSIONS: Our results indicated that high expression of miR-20a may be a credible indicator of worse prognosis in GIC. Further studies involving biological experiments and larger sample sizes should be performed to validate these findings. |
format | Online Article Text |
id | pubmed-7227208 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-72272082020-05-27 Prognostic implication and functional exploration for microRNA-20a as a molecular biomarker of gastrointestinal cancer Peng, Qiliang Zhao, Peifeng Shen, Yi Cheng, Ming Wu, Yongyou Zhu, Yaqun BMC Cancer Research Article BACKGROUND: It is generally accepted that microRNA-20a (miR-20a) is aberrantly expressed in gastrointestinal cancer (GIC), and may be associated with the prognosis of GIC patients. Nevertheless, the clinical prognostic value of miR-20a expression in GIC remains controversial. METHODS: We first conducted a comprehensive literature search of the clinical data and pooled them for evidence in assessing prognostic significance of miR-20a expression in GIC. Afterwards, we applied some bioinformatic analysis methods to explore the biological function of miR-20a and explain why miR-20a could act as an effective biomarker. RESULTS: The pooled results showed that enhanced miR-20a expression was significantly associated with poor survival in GIC patients (HR: 1.36; 95%CI: 1.21–1.52; P < 0.001). According to the subgroup analysis, the ethnicity, cancer type, sample source, and sample size may have an impact on the predictive roles for miR-20a. The gene ontologies enriched by the predicted miR-20a targets were highly associated with some important biological processes, cell components and molecular functions. Moreover, a series of prominent pathways linked with GIC carcinogenesis were identified. Ultimately, the crucial targets and modules were identified by constructing the protein-protein interaction network of miR-20a targets, which were highly associated with the initiation and progression of GIC according to previous molecular biology experiments. CONCLUSIONS: Our results indicated that high expression of miR-20a may be a credible indicator of worse prognosis in GIC. Further studies involving biological experiments and larger sample sizes should be performed to validate these findings. BioMed Central 2020-05-14 /pmc/articles/PMC7227208/ /pubmed/32410584 http://dx.doi.org/10.1186/s12885-020-06875-5 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Peng, Qiliang Zhao, Peifeng Shen, Yi Cheng, Ming Wu, Yongyou Zhu, Yaqun Prognostic implication and functional exploration for microRNA-20a as a molecular biomarker of gastrointestinal cancer |
title | Prognostic implication and functional exploration for microRNA-20a as a molecular biomarker of gastrointestinal cancer |
title_full | Prognostic implication and functional exploration for microRNA-20a as a molecular biomarker of gastrointestinal cancer |
title_fullStr | Prognostic implication and functional exploration for microRNA-20a as a molecular biomarker of gastrointestinal cancer |
title_full_unstemmed | Prognostic implication and functional exploration for microRNA-20a as a molecular biomarker of gastrointestinal cancer |
title_short | Prognostic implication and functional exploration for microRNA-20a as a molecular biomarker of gastrointestinal cancer |
title_sort | prognostic implication and functional exploration for microrna-20a as a molecular biomarker of gastrointestinal cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7227208/ https://www.ncbi.nlm.nih.gov/pubmed/32410584 http://dx.doi.org/10.1186/s12885-020-06875-5 |
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