Cargando…
CIPR: a web-based R/shiny app and R package to annotate cell clusters in single cell RNA sequencing experiments
BACKGROUND: Single cell RNA sequencing (scRNAseq) has provided invaluable insights into cellular heterogeneity and functional states in health and disease. During the analysis of scRNAseq data, annotating the biological identity of cell clusters is an important step before downstream analyses and it...
Autores principales: | Ekiz, H. Atakan, Conley, Christopher J., Stephens, W. Zac, O’Connell, Ryan M. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7227235/ https://www.ncbi.nlm.nih.gov/pubmed/32414321 http://dx.doi.org/10.1186/s12859-020-3538-2 |
Ejemplares similares
-
ranacapa: An R package and Shiny web app to explore environmental DNA data with exploratory statistics and interactive visualizations
por: Kandlikar, Gaurav S., et al.
Publicado: (2018) -
tinselR—an R Shiny Application for Annotating Phylogenetic Trees
por: Hamlin, Jennafer A. P., et al.
Publicado: (2021) -
ChromatoShiny: an interactive R/Shiny App for plotting chromatography profiles
por: Kochanova, Natalia Y., et al.
Publicado: (2023) -
ROGUE: an R Shiny app for RNA sequencing analysis and biomarker discovery
por: Farrel, Alvin, et al.
Publicado: (2023) -
CANDI: an R package and Shiny app for annotating radiographs and evaluating computer-aided diagnosis
por: Badgeley, Marcus A, et al.
Publicado: (2019)