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A simple model for glioma grading based on texture analysis applied to conventional brain MRI

Accuracy of glioma grading is fundamental for the diagnosis, treatment planning and prognosis of patients. The purpose of this work was to develop a low-cost and easy-to-implement classification model which distinguishes low-grade gliomas (LGGs) from high-grade gliomas (HGGs), through texture analys...

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Autores principales: Suárez-García, José Gerardo, Hernández-López, Javier Miguel, Moreno-Barbosa, Eduardo, de Celis-Alonso, Benito
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7228074/
https://www.ncbi.nlm.nih.gov/pubmed/32413034
http://dx.doi.org/10.1371/journal.pone.0228972
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author Suárez-García, José Gerardo
Hernández-López, Javier Miguel
Moreno-Barbosa, Eduardo
de Celis-Alonso, Benito
author_facet Suárez-García, José Gerardo
Hernández-López, Javier Miguel
Moreno-Barbosa, Eduardo
de Celis-Alonso, Benito
author_sort Suárez-García, José Gerardo
collection PubMed
description Accuracy of glioma grading is fundamental for the diagnosis, treatment planning and prognosis of patients. The purpose of this work was to develop a low-cost and easy-to-implement classification model which distinguishes low-grade gliomas (LGGs) from high-grade gliomas (HGGs), through texture analysis applied to conventional brain MRI. Different combinations of MRI contrasts (T(1Gd) and T(2)) and one segmented glioma region (necrotic and non-enhancing tumor core, NCR/NET) were studied. Texture features obtained from the gray level size zone matrix (GLSZM) were calculated. An under-sampling method was proposed to divide the data into different training subsets and subsequently extract complementary information for the creation of distinct classification models. The sensitivity, specificity and accuracy of the models were calculated, and the best model explicitly reported. The best model included only three texture features and reached a sensitivity, specificity and accuracy of 94.12%, 88.24% and 91.18%, respectively. According to the features of the model, when the NCR/NET region was studied, HGGs had a more heterogeneous texture than LGGs in the T(1Gd) images, and LGGs had a more heterogeneous texture than HGGs in the T(2) images. These novel results partially contrast with results from the literature. The best model proved to be useful for the classification of gliomas. Complementary results showed that the heterogeneity of gliomas depended on the MRI contrast studied. The chosen model stands out as a simple, low-cost, easy-to-implement, reproducible and highly accurate glioma classifier. Importantly, it should be accessible to populations with reduced economic and scientific resources.
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spelling pubmed-72280742020-06-01 A simple model for glioma grading based on texture analysis applied to conventional brain MRI Suárez-García, José Gerardo Hernández-López, Javier Miguel Moreno-Barbosa, Eduardo de Celis-Alonso, Benito PLoS One Research Article Accuracy of glioma grading is fundamental for the diagnosis, treatment planning and prognosis of patients. The purpose of this work was to develop a low-cost and easy-to-implement classification model which distinguishes low-grade gliomas (LGGs) from high-grade gliomas (HGGs), through texture analysis applied to conventional brain MRI. Different combinations of MRI contrasts (T(1Gd) and T(2)) and one segmented glioma region (necrotic and non-enhancing tumor core, NCR/NET) were studied. Texture features obtained from the gray level size zone matrix (GLSZM) were calculated. An under-sampling method was proposed to divide the data into different training subsets and subsequently extract complementary information for the creation of distinct classification models. The sensitivity, specificity and accuracy of the models were calculated, and the best model explicitly reported. The best model included only three texture features and reached a sensitivity, specificity and accuracy of 94.12%, 88.24% and 91.18%, respectively. According to the features of the model, when the NCR/NET region was studied, HGGs had a more heterogeneous texture than LGGs in the T(1Gd) images, and LGGs had a more heterogeneous texture than HGGs in the T(2) images. These novel results partially contrast with results from the literature. The best model proved to be useful for the classification of gliomas. Complementary results showed that the heterogeneity of gliomas depended on the MRI contrast studied. The chosen model stands out as a simple, low-cost, easy-to-implement, reproducible and highly accurate glioma classifier. Importantly, it should be accessible to populations with reduced economic and scientific resources. Public Library of Science 2020-05-15 /pmc/articles/PMC7228074/ /pubmed/32413034 http://dx.doi.org/10.1371/journal.pone.0228972 Text en © 2020 Suárez-García et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Suárez-García, José Gerardo
Hernández-López, Javier Miguel
Moreno-Barbosa, Eduardo
de Celis-Alonso, Benito
A simple model for glioma grading based on texture analysis applied to conventional brain MRI
title A simple model for glioma grading based on texture analysis applied to conventional brain MRI
title_full A simple model for glioma grading based on texture analysis applied to conventional brain MRI
title_fullStr A simple model for glioma grading based on texture analysis applied to conventional brain MRI
title_full_unstemmed A simple model for glioma grading based on texture analysis applied to conventional brain MRI
title_short A simple model for glioma grading based on texture analysis applied to conventional brain MRI
title_sort simple model for glioma grading based on texture analysis applied to conventional brain mri
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7228074/
https://www.ncbi.nlm.nih.gov/pubmed/32413034
http://dx.doi.org/10.1371/journal.pone.0228972
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